CI: update docker file paths in CI config

.docker/create_dev_env.sh

@@ -17,11 +17,10 @@ conda create -y ${channels[@]}   \
       file-tree file-tree-fsl    \
       fsl_sub                    \
       fsl_sub_plugin_slurm       \
-      fsl_sub_plugin_sge
+      fsl_sub_plugin_sge         \
+      jinja2
 
 source activate ${envdir}
 pip install dmri-amico
 pip install git+https://git.fmrib.ox.ac.uk/ndcn0236/pipe-tree.git
 pip install git+https://git.fmrib.ox.ac.uk/fsl/gradunwarp.git
-
-# CREATE DOCKER IMAGE

.gitlab-ci.yml

@@ -19,8 +19,8 @@ build-dev-docker-image:
     - echo $DOCKER_AUTH_CONFIG > $HOME/.docker/config.json
     - TAG="$(date +%Y%m%d).${CI_COMMIT_SHORT_SHA}"
     - IMAGE="pauldmccarthy/bip-dev"
-    - DOCKERFILE=docker/Dockerfile
-    - docker build -t "${IMAGE}:${TAG}" -t "${IMAGE}:latest" -f ${DOCKERFILE} ./docker
+    - DOCKERFILE=.docker/Dockerfile
+    - docker build -t "${IMAGE}:${TAG}" -t "${IMAGE}:latest" -f ${DOCKERFILE} ./.docker
     - docker push "${IMAGE}:${TAG}"
     - docker push "${IMAGE}:latest"