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Commit 93c0d66b authored by Duncan Mortimer's avatar Duncan Mortimer Committed by Matthew Webster
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Add some dependencies to the install_version list of commands

Add mirror chooser in R so that first install_version doesn't fail.
parent 5521addb
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......@@ -38,9 +38,13 @@ sudo apt-get install r-base r-cran-devtools
Then on either Linux:
require(devtools)
chooseCRANmirror()
install_version("kernlab", version="0.9-24")
install_version("ROCR", version="1.0-7")
install_version("class", version="7.3-14")
install_version("mvtnorm", version="1.0.8")
install_version("multcomp", version="1.4-8")
install_version("coin", version="1.2.2")
install_version("party", version="1.0-25")
install_version("e1071", version="1.6-7")
install_version("randomForest", version="4.6-12")
......@@ -72,6 +76,10 @@ $FSLDIR/fslpython/envs/fslpython/bin/R
and run the following (with sudo if FSLDIR modifications needs admin rights):
require(devtools)
chooseCRANmirror()
install_version("mvtnorm", version="1.0-8")
install_version("multcomp", version="1.4-8")
install_version("coin", version="1.2-2")
install_version("party", version="1.0-25")
N.B. the first time this command is run it will request you choose a CRAN mirror - after
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