- Mar 23, 2023
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Duncan Mortimer authored
Change development status
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- Mar 22, 2023
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Duncan Mortimer authored
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Duncan Mortimer authored
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Duncan Mortimer authored
on Linux hosts Test for non-file redirecting exception not matching generic error message
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Duncan Mortimer authored
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Duncan Mortimer authored
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Duncan Mortimer authored
Change license to Apache2, add ability to build+publish to PyPi See merge request !6
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Duncan Mortimer authored
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Duncan Mortimer authored
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Paul McCarthy authored
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Paul McCarthy authored
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Paul McCarthy authored
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Paul McCarthy authored
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Duncan Mortimer authored
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- Mar 20, 2023
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Duncan Mortimer authored
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Duncan Mortimer authored
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- Feb 03, 2023
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Duncan Mortimer authored
as this supports moving files across file systems
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- Nov 24, 2022
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Duncan Mortimer authored
Lint clean up
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Duncan Mortimer authored
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- Sep 30, 2022
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Duncan Mortimer authored
due to logic error in check
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Duncan Mortimer authored
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Duncan Mortimer authored
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Duncan Mortimer authored
Warn if missing has_parallel_envs but queues have them Fail if has_parallel_envs true but no parallel envs defined Improve example queue config to make clear parallel_envs are unnecessary on SLURM Update tests to avoid warnings during testing
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Duncan Mortimer authored
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- Sep 29, 2022
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Duncan Mortimer authored
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Duncan Mortimer authored
Replace fsl_sub.utils with fsl_sub.config in README See merge request !5
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Duncan Mortimer authored
Change default for has_parallel_envs to false. Prevents a crash if an obsolete configuration is used lacking this value on SLURM clusters
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Duncan Mortimer authored
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Duncan Mortimer authored
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Duncan Mortimer authored
Initial validation tests for map_ram/large_ram_split_pe/parallel_envs issues
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Duncan Mortimer authored
Standard jobs should not set FSLSUB_ARRAY*_VAR variables for jobs run via the shell plugin. Fixes issue #14
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- Sep 28, 2022
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Duncan Mortimer authored
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- Apr 20, 2022
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Michiel Cottaar authored
The `has_queues` and `has_coprocessor` functions are defined in `fsl_sub.config`, not in `fsl_sub.utils`.
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- Dec 17, 2021
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Duncan Mortimer authored
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- Dec 06, 2021
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Duncan Mortimer authored
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- Dec 03, 2021
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Duncan Mortimer authored
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Duncan Mortimer authored
--extra was being lost when processing the FSLSUB_EXTRA env vars As SLURM doesn't support parallel environments the thread/slot processing would crash. This has been fixed by adding a new configuration option for backends 'has_parallel_envs' -s/--parallelenv now accepts ',<int>' and '<int>' as short hand when using a non-PE capable backend. Help text for --parallelenv has been updated to reflect the above Documentation added for this option
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- Nov 25, 2021
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Paul McCarthy authored
Condafy fsl-sub See merge request !1
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Paul McCarthy authored
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Paul McCarthy authored
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