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FSL
fslpy
Commits
1c090d38
Commit
1c090d38
authored
7 years ago
by
Paul McCarthy
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Unit test for resample method
parent
2eb4e3bf
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tests/test_image.py
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1c090d38
...
@@ -1000,3 +1000,36 @@ def _test_Image_save(imgtype):
...
@@ -1000,3 +1000,36 @@ def _test_Image_save(imgtype):
finally
:
finally
:
shutil
.
rmtree
(
testdir
)
shutil
.
rmtree
(
testdir
)
def
test_image_resample
(
seed
):
with
testdir
()
as
td
:
fname
=
op
.
join
(
td
,
'
test.nii
'
)
# Random base image shapes
for
i
in
range
(
50
):
shape
=
np
.
random
.
randint
(
5
,
100
,
3
)
make_random_image
(
fname
,
shape
)
img
=
fslimage
.
Image
(
fname
)
# resampling to the same shape should be a no-op
assert
np
.
all
(
img
.
resample
(
shape
)
==
img
[:])
# Random resampled image shapes
for
i
in
range
(
10
):
rshape
=
np
.
random
.
randint
(
5
,
100
,
3
)
resampled
=
img
.
resample
(
rshape
)
assert
tuple
(
resampled
.
shape
)
==
tuple
(
rshape
)
# Test a 4D image
make_random_image
(
fname
,
(
10
,
10
,
10
,
10
))
img
=
fslimage
.
Image
(
fname
)
slc
=
(
slice
(
None
),
slice
(
None
),
slice
(
None
),
3
)
assert
np
.
all
(
img
.
resample
(
img
.
shape
[:
3
],
slc
)
==
img
[...,
3
])
assert
tuple
(
img
.
resample
((
15
,
15
,
15
),
slc
).
shape
)
==
(
15
,
15
,
15
)
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