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FSL
fslpy
Commits
686cde3a
Commit
686cde3a
authored
5 years ago
by
Paul McCarthy
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TEST: Image.save semantics have changed
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tests/test_image_advanced.py
+14
-19
14 additions, 19 deletions
tests/test_image_advanced.py
with
14 additions
and
19 deletions
tests/test_image_advanced.py
+
14
−
19
View file @
686cde3a
...
@@ -187,6 +187,15 @@ def _test_image_indexed_save(threaded):
...
@@ -187,6 +187,15 @@ def _test_image_indexed_save(threaded):
# make sure the data range is correct
# make sure the data range is correct
assert
img
.
dataRange
==
(
0
,
40
)
assert
img
.
dataRange
==
(
0
,
40
)
# Save the image to a different
# location (no changes to data though)
filename
=
op
.
join
(
testdir
,
'
image2.nii.gz
'
)
img
.
save
(
filename
)
# known data range
# should not have changed
assert
img
.
dataRange
==
(
0
,
40
)
# change some data
# change some data
data
=
np
.
zeros
((
100
,
100
,
100
))
data
=
np
.
zeros
((
100
,
100
,
100
))
data
[:]
=
45
data
[:]
=
45
...
@@ -195,35 +204,21 @@ def _test_image_indexed_save(threaded):
...
@@ -195,35 +204,21 @@ def _test_image_indexed_save(threaded):
if
threaded
:
if
threaded
:
img
.
getImageWrapper
().
getTaskThread
().
waitUntilIdle
()
img
.
getImageWrapper
().
getTaskThread
().
waitUntilIdle
()
# save the image
# save the image - this will
# cause the image data to be
# loaded into memory
img
.
save
()
img
.
save
()
assert
img
.
dataRange
==
(
0
,
45
)
# access the data - index should
# get rebuilt to this point
img
[...,
0
]
img
[...,
40
]
if
threaded
:
if
threaded
:
img
.
getImageWrapper
().
getTaskThread
().
waitUntilIdle
()
img
.
getImageWrapper
().
getTaskThread
().
waitUntilIdle
()
# make sure we got the modified data
assert
img
.
dataRange
==
(
0
,
45
)
img
[...,
49
]
if
threaded
:
img
.
getImageWrapper
().
getTaskThread
().
waitUntilIdle
()
# make sure we got the modified data
assert
img
.
dataRange
==
(
0
,
49
)
assert
img
.
dataRange
==
(
0
,
49
)
assert
np
.
all
(
img
[...,
40
]
==
data
)
# Finally, reload, and verify the change
# Finally, reload, and verify the change
img
=
fslimage
.
Image
(
filename
)
img
=
fslimage
.
Image
(
filename
)
assert
np
.
all
(
img
[...,
40
]
==
45
)
assert
np
.
all
(
img
[...,
40
]
==
data
)
@pytest.mark.longtest
@pytest.mark.longtest
...
...
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