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FSL
fslpy
Commits
90b24051
Commit
90b24051
authored
5 years ago
by
Paul McCarthy
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TEST: Test query with multiple sub-trees. Passes against <=2.8.1, fails
against >=2.8.2.
parent
d5b35844
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tests/test_filetree/test_query.py
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tests/test_filetree/test_query.py
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tests/test_filetree/test_query.py
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90b24051
...
...
@@ -396,6 +396,104 @@ def test_query_subtree():
op
.
join
(
'
subj-03
'
,
'
surf
'
,
'
R.white.gii
'
)]
def
test_query_multi_subtree
():
tree1
=
tw
.
dedent
(
"""
subj-{participant}
T1w.nii.gz (T1w)
native
->surface space=native (surf_native)
mni
->surface space=mni (surf_mni)
"""
)
tree2
=
tw
.
dedent
(
"""
{hemi}.{space}.gii (surface)
"""
)
files
=
[
op
.
join
(
'
subj-01
'
,
'
T1w.nii.gz
'
),
op
.
join
(
'
subj-01
'
,
'
native
'
,
'
L.native.gii
'
),
op
.
join
(
'
subj-01
'
,
'
native
'
,
'
R.native.gii
'
),
op
.
join
(
'
subj-01
'
,
'
mni
'
,
'
L.mni.gii
'
),
op
.
join
(
'
subj-01
'
,
'
mni
'
,
'
R.mni.gii
'
),
op
.
join
(
'
subj-02
'
,
'
T1w.nii.gz
'
),
op
.
join
(
'
subj-02
'
,
'
native
'
,
'
L.native.gii
'
),
op
.
join
(
'
subj-02
'
,
'
native
'
,
'
R.native.gii
'
),
op
.
join
(
'
subj-02
'
,
'
mni
'
,
'
L.mni.gii
'
),
op
.
join
(
'
subj-02
'
,
'
mni
'
,
'
R.mni.gii
'
),
op
.
join
(
'
subj-03
'
,
'
T1w.nii.gz
'
),
op
.
join
(
'
subj-03
'
,
'
native
'
,
'
L.native.gii
'
),
op
.
join
(
'
subj-03
'
,
'
native
'
,
'
R.native.gii
'
),
op
.
join
(
'
subj-03
'
,
'
mni
'
,
'
L.mni.gii
'
),
op
.
join
(
'
subj-03
'
,
'
mni
'
,
'
R.mni.gii
'
)]
with
testdir
(
files
):
with
open
(
'
tree1.tree
'
,
'
wt
'
)
as
f
:
f
.
write
(
tree1
)
with
open
(
'
surface.tree
'
,
'
wt
'
)
as
f
:
f
.
write
(
tree2
)
tree
=
filetree
.
FileTree
.
read
(
'
tree1.tree
'
,
'
.
'
)
query
=
filetree
.
FileTreeQuery
(
tree
)
assert
sorted
(
query
.
templates
)
==
[
'
T1w
'
,
'
surf_mni/surface
'
,
'
surf_native/surface
'
]
qvars
=
query
.
variables
()
assert
sorted
(
qvars
.
keys
())
==
[
'
hemi
'
,
'
participant
'
,
'
space
'
]
assert
qvars
[
'
hemi
'
]
==
[
'
L
'
,
'
R
'
]
assert
qvars
[
'
participant
'
]
==
[
'
01
'
,
'
02
'
,
'
03
'
]
assert
qvars
[
'
space
'
]
==
[
'
mni
'
,
'
native
'
]
qvars
=
query
.
variables
(
'
T1w
'
)
assert
sorted
(
qvars
.
keys
())
==
[
'
participant
'
]
assert
qvars
[
'
participant
'
]
==
[
'
01
'
,
'
02
'
,
'
03
'
]
qvars
=
query
.
variables
(
'
surf_mni/surface
'
)
assert
sorted
(
qvars
.
keys
())
==
[
'
hemi
'
,
'
participant
'
,
'
space
'
]
assert
qvars
[
'
hemi
'
]
==
[
'
L
'
,
'
R
'
]
assert
qvars
[
'
participant
'
]
==
[
'
01
'
,
'
02
'
,
'
03
'
]
assert
qvars
[
'
space
'
]
==
[
'
mni
'
,
'
native
'
]
qvars
=
query
.
variables
(
'
surf_native/surface
'
)
assert
sorted
(
qvars
.
keys
())
==
[
'
hemi
'
,
'
participant
'
,
'
space
'
]
assert
qvars
[
'
hemi
'
]
==
[
'
L
'
,
'
R
'
]
assert
qvars
[
'
participant
'
]
==
[
'
01
'
,
'
02
'
,
'
03
'
]
assert
qvars
[
'
space
'
]
==
[
'
mni
'
,
'
native
'
]
got
=
query
.
query
(
'
T1w
'
)
assert
[
m
.
filename
for
m
in
sorted
(
got
)]
==
[
op
.
join
(
'
subj-01
'
,
'
T1w.nii.gz
'
),
op
.
join
(
'
subj-02
'
,
'
T1w.nii.gz
'
),
op
.
join
(
'
subj-03
'
,
'
T1w.nii.gz
'
)]
got
=
query
.
query
(
'
T1w
'
,
participant
=
'
01
'
)
assert
[
m
.
filename
for
m
in
sorted
(
got
)]
==
[
op
.
join
(
'
subj-01
'
,
'
T1w.nii.gz
'
)]
got
=
query
.
query
(
'
surf_mni/surface
'
)
assert
[
m
.
filename
for
m
in
sorted
(
got
)]
==
[
op
.
join
(
'
subj-01
'
,
'
mni
'
,
'
L.mni.gii
'
),
op
.
join
(
'
subj-01
'
,
'
mni
'
,
'
R.mni.gii
'
),
op
.
join
(
'
subj-02
'
,
'
mni
'
,
'
L.mni.gii
'
),
op
.
join
(
'
subj-02
'
,
'
mni
'
,
'
R.mni.gii
'
),
op
.
join
(
'
subj-03
'
,
'
mni
'
,
'
L.mni.gii
'
),
op
.
join
(
'
subj-03
'
,
'
mni
'
,
'
R.mni.gii
'
)]
got
=
query
.
query
(
'
surf_native/surface
'
,
hemi
=
'
L
'
)
assert
[
m
.
filename
for
m
in
sorted
(
got
)]
==
[
op
.
join
(
'
subj-01
'
,
'
native
'
,
'
L.native.gii
'
),
op
.
join
(
'
subj-02
'
,
'
native
'
,
'
L.native.gii
'
),
op
.
join
(
'
subj-03
'
,
'
native
'
,
'
L.native.gii
'
)]
got
=
query
.
query
(
'
surf_native/surface
'
,
space
=
'
mni
'
)
assert
[
m
.
filename
for
m
in
sorted
(
got
)]
==
[]
got
=
query
.
query
(
'
surf_native/surface
'
,
space
=
'
native
'
,
hemi
=
'
R
'
)
assert
[
m
.
filename
for
m
in
sorted
(
got
)]
==
[
op
.
join
(
'
subj-01
'
,
'
native
'
,
'
R.native.gii
'
),
op
.
join
(
'
subj-02
'
,
'
native
'
,
'
R.native.gii
'
),
op
.
join
(
'
subj-03
'
,
'
native
'
,
'
R.native.gii
'
)]
def
test_scan
():
with
_test_data
():
...
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