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Commit bc07af23 authored by Matthew Webster's avatar Matthew Webster
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RF: extract_noise to fsl_ents

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...@@ -124,7 +124,7 @@ setup( ...@@ -124,7 +124,7 @@ setup(
'imglob = fsl.scripts.imglob:main', 'imglob = fsl.scripts.imglob:main',
'atlasq = fsl.scripts.atlasq:main', 'atlasq = fsl.scripts.atlasq:main',
'atlasquery = fsl.scripts.atlasq:atlasquery_emulation', 'atlasquery = fsl.scripts.atlasq:atlasquery_emulation',
'fsl_ents = fsl.scripts.extract_noise:main', 'fsl_ents = fsl.scripts.fsl_ents:main',
] ]
} }
) )
#!/usr/bin/env python #!/usr/bin/env python
# #
# test_extract_noise.py - # test_fsl_ents.py -
# #
# Author: Paul McCarthy <pauldmccarthy@gmail.com> # Author: Paul McCarthy <pauldmccarthy@gmail.com>
# #
...@@ -12,7 +12,7 @@ import numpy as np ...@@ -12,7 +12,7 @@ import numpy as np
import pytest import pytest
import fsl.utils.tempdir as tempdir import fsl.utils.tempdir as tempdir
import fsl.scripts.extract_noise as extn import fsl.scripts.fsl_ents as extn
def test_genComponentIndexList(): def test_genComponentIndexList():
...@@ -87,7 +87,7 @@ def test_loadConfoundFiles(): ...@@ -87,7 +87,7 @@ def test_loadConfoundFiles():
extn.loadConfoundFiles(conffiles, npts) extn.loadConfoundFiles(conffiles, npts)
def test_extract_noise(): def test_fsl_ents():
with tempdir.tempdir() as td: with tempdir.tempdir() as td:
...@@ -115,13 +115,13 @@ def test_extract_noise(): ...@@ -115,13 +115,13 @@ def test_extract_noise():
assert np.all(np.loadtxt('out.txt') == exp) assert np.all(np.loadtxt('out.txt') == exp)
def test_extract_noise_usage(): def test_fsl_ents_usage():
with pytest.raises(SystemExit) as e: with pytest.raises(SystemExit) as e:
extn.main([]) extn.main([])
assert e.value.code == 0 assert e.value.code == 0
def test_extract_noise_badargs(): def test_fsl_ents_badargs():
with pytest.raises(SystemExit) as e: with pytest.raises(SystemExit) as e:
extn.main(['non-existent.ica', '1', '2', '3']) extn.main(['non-existent.ica', '1', '2', '3'])
......
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