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FSL
fslpy
Commits
d5039cf7
Commit
d5039cf7
authored
5 years ago
by
Paul McCarthy
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Merge branch 'bf/wait' into 'master'
Bf/wait See merge request fsl/fslpy!210
parents
38411970
61daff3d
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Pipeline
#5121
passed
5 years ago
Stage: test
Stage: style
Stage: doc
Stage: deploy
Changes
2
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1
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CHANGELOG.rst
+2
-1
2 additions, 1 deletion
CHANGELOG.rst
fsl/utils/fslsub.py
+4
-3
4 additions, 3 deletions
fsl/utils/fslsub.py
with
6 additions
and
4 deletions
CHANGELOG.rst
+
2
−
1
View file @
d5039cf7
...
...
@@ -58,7 +58,8 @@ Fixed
* Updated the :func:`.prepareArgs` function to use ``shlex.split`` when
preparing shell command arguments, instead of performing a naive whitespace
split.
* Fixed some bugs in the :func:`.fslsub.info` function.
* Fixed some bugs in the :func:`.fslsub.info` and :func:`.fslinfo.wait`
functions.
2.8.4 (Monday 2nd March 2020)
...
...
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fsl/utils/fslsub.py
+
4
−
3
View file @
d5039cf7
...
...
@@ -160,8 +160,9 @@ def info(job_id):
return
{}
res
=
{}
for
line
in
result
.
splitlines
()[
1
:]:
key
,
value
=
line
.
split
(
'
:
'
,
1
)
res
[
key
.
strip
()]
=
value
.
strip
()
kv
=
line
.
split
(
'
:
'
,
1
)
if
len
(
kv
)
==
2
:
res
[
kv
[
0
].
strip
()]
=
kv
[
1
].
strip
()
return
res
...
...
@@ -208,7 +209,7 @@ def wait(job_ids):
before continuing
"""
start_time
=
time
.
time
()
for
job_id
in
_flatten_job_ids
(
job_ids
):
for
job_id
in
_flatten_job_ids
(
job_ids
)
.
split
(
'
,
'
)
:
log
.
debug
(
'
Waiting for job {}
'
.
format
(
job_id
))
while
len
(
info
(
job_id
))
>
0
:
wait_time
=
min
(
max
(
1
,
(
time
.
time
()
-
start_time
)
/
3.
),
20
)
...
...
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