Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
M
melodic
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Container Registry
Model registry
Operate
Environments
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
FSL
melodic
Commits
bce5b6cd
Commit
bce5b6cd
authored
4 years ago
by
Paul McCarthy
Browse files
Options
Downloads
Patches
Plain Diff
MNT: clean up makefile
parent
7054a8cd
No related branches found
No related tags found
1 merge request
!9
mnt/conda
Changes
1
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
Makefile
+30
-83
30 additions, 83 deletions
Makefile
with
30 additions
and
83 deletions
Makefile
+
30
−
83
View file @
bce5b6cd
...
...
@@ -2,97 +2,44 @@
include
${FSLCONFDIR}/default.mk
OPTFLAGS
=
-O3
-Wno-deprecated
-ggdb
-g
OPTFLAGS_alphaev6-dec-osf5.0-gcc2.95.2
=
-O3
-mieee
-mfp-trap-mode
=
sui
PROJNAME
=
melodic
XFILES
=
fsl_glm fsl_sbca fsl_mvlm fsl_regfilt
\
fsl_schurprod fsl_bwtf melodic
TESTXFILES
=
test
RUNTCLS
=
Melodic
SCRIPTS
=
melodicreport dual_regression
SOFILES
=
libfsl-ggmix.so
PROJNAME
=
melodic
USRINCFLAGS
=
`
pkg-config CiftiLib
--cflags
`
LIBS
=
-lfsl-utils
-lfsl-newimage
-lfsl-miscplot
-lfsl-miscpic
\
-lfsl-miscmaths
-lfsl-NewNifti
-lfsl-znz
-lfsl-cprob
\
-lgdc
-lgd
-lpng
`
pkg-config CiftiLib
--libs
`
USRINCFLAGS
=
-I
${
INC_NEWMAT
}
-I
${
INC_CPROB
}
-I
${
INC_GD
}
-I
${
INC_GDC
}
-I
${
INC_PNG
}
-I
${
INC_ZLIB
}
-DCIFTILIB_USE_XMLPP
-I
${
FSLEXTINC
}
-I
${
INC_XML2
}
-I
${
INC_XML++
}
-I
${
INC_XML++CONF
}
-I
${
INC_BOOST
}
-I
${
FSLDIR
}
/include/ciftiio
USRLDFLAGS
=
-L
${
LIB_NEWMAT
}
-L
${
LIB_CPROB
}
-L
${
LIB_GD
}
-L
${
LIB_GDC
}
-L
${
LIB_PNG
}
-L
${
LIB_ZLIB
}
all
:
${SOFILES} ${XFILES}
UNAME
:=
$(
shell
uname
)
ifeq
(${UNAME},Darwin)
LIBS
=
-liconv
endif
libfsl-ggmix.so
:
ggmix.o
$(
CXX
)
${
CXXFLAGS
}
-shared
-o
$@
$^
LIBS
+=
-lutils
-lnewimage
-lmiscplot
-lmiscpic
-lmiscmaths
-lNewNifti
-lcifti
-lxml
++-2.6
-lxml2
-lboost_filesystem
-lboost_system
-lznz
-lcprob
-lm
-lgdc
-lgd
-lpng
-lz
melodic
:
meloptions.o melhlprfns.o melgmix.o meldata.o melpca.o melica.o melreport.o melodic.o
$(
CXX
)
${
CXXFLAGS
}
-o
$@
$^
${
LDFLAGS
}
TEST_OBJS
=
test.o
test
:
test.o
$(
CXX
)
${
CXXFLAGS
}
-o
$@
$^
${
LDFLAGS
}
GGMIX_OBJS
=
ggmix.o
fsl_glm
:
melhlprfns.o fsl_glm.o
$(
CXX
)
${
CXXFLAGS
}
-o
$@
$^
${
LDFLAGS
}
FSL_GLM_OBJS
=
melhlprfns.o fsl_glm.o
fsl_sbca
:
melhlprfns.o fsl_sbca.o
$(
CXX
)
${
CXXFLAGS
}
-o
$@
$^
${
LDFLAGS
}
FSL_SBCA_OBJS
=
melhlprfns.o fsl_sbca.o
fsl_schurprod
:
melhlprfns.o fsl_schurprod.o
$(
CXX
)
${
CXXFLAGS
}
-o
$@
$^
${
LDFLAGS
}
FSL_MVLM_OBJS
=
melhlprfns.o fsl_mvlm.o
fsl_mvlm
:
melhlprfns.o fsl_mvlm.o
$(
CXX
)
${
CXXFLAGS
}
-o
$@
$^
${
LDFLAGS
}
FSL_BWTF_OBJS
=
melhlprfns.o fsl_bwtf.o
fsl_bwtf
:
melhlprfns.o fsl_bwtf.o
$(
CXX
)
${
CXXFLAGS
}
-o
$@
$^
${
LDFLAGS
}
FSL_REGFILT_OBJS
=
melhlprfns.o fsl_regfilt.o
FSL_SCHURPROD_OBJS
=
melhlprfns.o fsl_schurprod.o
MELODIC_OBJS
=
meloptions.o melhlprfns.o melgmix.o meldata.o melpca.o melica.o melreport.o melodic.o
TESTXFILES
=
test
XFILES
=
fsl_glm fsl_sbca fsl_mvlm fsl_regfilt fsl_schurprod fsl_bwtf melodic
OTHERFILES
=
BUILD_SBCA
=
$(
shell
[
-f
fsl_sbca.cc
]
;
echo
$$
?
)
ifeq
($(BUILD_SBCA), 0)
OTHERFILES
+=
fsl_sbca
endif
BUILD_MVLM
=
$(
shell
[
-f
fsl_mvlm.cc
]
;
echo
$$
?
)
ifeq
($(BUILD_MVLM), 0)
OTHERFILES
+=
fsl_mvlm
endif
BUILD_BWTF
=
$(
shell
[
-f
fsl_bwtf.cc
]
;
echo
$$
?
)
ifeq
($(BUILD_BPTF), 0)
OTHERFILES
+=
fsl_bwtf
endif
BUILD_SCHUR
=
$(
shell
[
-f
fsl_schurprod.cc
]
;
echo
$$
?
)
ifeq
($(BUILD_SCHUR), 0)
OTHERFILES
+=
fsl_schurprod
endif
XFILES
+=
${
OTHERFILES
}
RUNTCLS
=
Melodic
SCRIPTS
=
melodicreport dual_regression
all
:
ggmix fsl_regfilt fsl_glm melodic ${OTHERFILES}
ggmix
:
${GGMIX_OBJS}
${
AR
}
-r
libggmix.a
${
GGMIX_OBJS
}
melodic
:
${MELODIC_OBJS}
$(
CXX
)
${
CXXFLAGS
}
${
LDFLAGS
}
-o
$@
${
MELODIC_OBJS
}
${
LIBS
}
test
:
${TEST_OBJS}
$(
CXX
)
${
CXXFLAGS
}
${
LDFLAGS
}
-o
$@
${
TEST_OBJS
}
${
LIBS
}
fsl_glm
:
${FSL_GLM_OBJS}
$(
CXX
)
${
CXXFLAGS
}
${
LDFLAGS
}
-o
$@
${
FSL_GLM_OBJS
}
${
LIBS
}
fsl_sbca
:
${FSL_SBCA_OBJS}
$(
CXX
)
${
CXXFLAGS
}
${
LDFLAGS
}
-o
$@
${
FSL_SBCA_OBJS
}
${
LIBS
}
fsl_schurprod
:
${FSL_SCHURPROD_OBJS}
$(
CXX
)
${
CXXFLAGS
}
${
LDFLAGS
}
-o
$@
${
FSL_SCHURPROD_OBJS
}
${
LIBS
}
fsl_mvlm
:
${FSL_MVLM_OBJS}
$(
CXX
)
${
CXXFLAGS
}
${
LDFLAGS
}
-o
$@
${
FSL_MVLM_OBJS
}
${
LIBS
}
fsl_bwtf
:
${FSL_BWTF_OBJS}
$(
CXX
)
${
CXXFLAGS
}
${
LDFLAGS
}
-o
$@
${
FSL_BWTF_OBJS
}
${
LIBS
}
fsl_regfilt
:
${FSL_REGFILT_OBJS}
$(
CXX
)
${
CXXFLAGS
}
${
LDFLAGS
}
-o
$@
${
FSL_REGFILT_OBJS
}
${
LIBS
}
fsl_regfilt
:
melhlprfns.o fsl_regfilt.o
$(
CXX
)
${
CXXFLAGS
}
-o
$@
$^
${
LDFLAGS
}
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment