recomment --nobet per MJ suggestion

fsl_anat

@@ -30,7 +30,7 @@ Usage() {
     echo "  --weakbias                   used for images with smoother, more typical, bias fields (default setting)"
     echo "  --noreorient                 turn off step that does reorientation 2 standard (fslreorient2std)"
     echo "  --nocrop                     turn off step that does automated cropping (robustfov)"
-    echo "  --nobet                      turn off step that does brain extraction (BET or registration) - to use this the input image must already brain extracted"
+    #echo "  --nobet                      turn off step that does brain extraction (BET or registration) - to use this the input image must already brain extracted"
     echo "  --nobias                     turn off steps that do bias field correction (via FAST)"
     echo "  --noreg                      turn off steps that do registration to standard (FLIRT and FNIRT)"
     echo "  --nononlinreg                turn off step that does non-linear registration (FNIRT)"