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Commit 5b54eb96 authored by Taylor Hanayik's avatar Taylor Hanayik
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recomment --nobet per MJ suggestion

parent 61fb9df6
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1 merge request!3fix fsl_anat nonlinreg failure
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......@@ -30,7 +30,7 @@ Usage() {
echo " --weakbias used for images with smoother, more typical, bias fields (default setting)"
echo " --noreorient turn off step that does reorientation 2 standard (fslreorient2std)"
echo " --nocrop turn off step that does automated cropping (robustfov)"
echo " --nobet turn off step that does brain extraction (BET or registration) - to use this the input image must already brain extracted"
#echo " --nobet turn off step that does brain extraction (BET or registration) - to use this the input image must already brain extracted"
echo " --nobias turn off steps that do bias field correction (via FAST)"
echo " --noreg turn off steps that do registration to standard (FLIRT and FNIRT)"
echo " --nononlinreg turn off step that does non-linear registration (FNIRT)"
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