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Commit bdff2325 authored by Paul McCarthy's avatar Paul McCarthy :mountain_bicyclist:
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TEST: Add basic tests for truenet

parent 024655a6
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Tags 2407.0
1 merge request!64TEST: Add basic tests for truenet
Pipeline #24910 passed
truenet
\ No newline at end of file
#!/usr/bin/env bash
outdir=$1
indir=$2
mkdir -p ${outdir}/evaluate
for subjdir in ${indir}/preproc/*; do
subj=$(basename ${subjdir})
truenet evaluate \
-i ${indir}/preproc/${subjdir} \
-m mwsc -o ${outdir}/evaluate
#!/usr/bin/env bash
outdir=$1
indir=$2
mkdir -p ${outdir}/preproc
prepare_truenet_data \
--FLAIR=${indir}/rawdata/GE3T_101/FLAIR.nii.gz \
--T1=${indir}/rawdata/GE3T_101/T1.nii.gz \
--outname=${outdir}/preproc
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