Paul McCarthy authored 1 year ago and Matthew Webster committed 1 year ago

is entirely defined in options.h, and the linker may optimise out
libfsl-utils. The usage function is in options.cc though

is broken in FSL 6.0.0-6.0.5.2, due to issues with fslorient/fslswapdim. Also
test an alternate recipe which should work across all FSL versions

conventions.

The random element of running GPS is taken out by using precomputed gradient orientations.
The old implementation set a random subset of bvecs to b=0 (or to b=2000).
This is now fixed ensuring that the full bvecs are used for each shell.

data for evaluation

1), and to handle modification of existing image

there are sevaral definitions of MK, most of which are not compatible with the simplified kurtosis model implemented by --kurtdir. So, I decided not to compute anything at all.