Commits · 548b4240573726028625f8030fd2d64185fbe7f0 · FSL / pyfeeds-tests · GitLab

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Jan 24, 2024
- changed --ol_type=slice to --ol_type=sw in feedsRun.EddyS2V · 548b4240
  Jesper Andersson authored 1 year ago
  
  View commits for tag 2401.1 2401.1
  
  548b4240
Jan 18, 2024
- MNT: Only run single threaded when being invoked by pyfeeds (requires pyfeeds 0.12.4) · 8a81da22
  Paul McCarthy authored 1 year ago
  
  8a81da22
Jan 16, 2024
- MNT: Use 6 threads · bb6c1862
  Paul McCarthy authored 2 years ago and Paul McCarthy committed 1 year ago
  
  bb6c1862
- BF: expand array when calling fsl_sub · 5128f6bc
  Paul McCarthy authored 2 years ago and Paul McCarthy committed 1 year ago
  
  5128f6bc
- BF: eddy_ is stripped from variant in sed call above · d22725ae
  Paul McCarthy authored 2 years ago and Paul McCarthy committed 1 year ago
  
  d22725ae
- BF: get nthreads from basename, not full executable path · c51427e1
  Paul McCarthy authored 2 years ago and Paul McCarthy committed 1 year ago
  
  c51427e1
- RF: Use an array instead of separate vars for extra arguments · 9fcc45cb
  Paul McCarthy authored 2 years ago and Paul McCarthy committed 1 year ago
  
  9fcc45cb
- RF: Typo in varname. Only request an openmp/multi-core node for --nthr[N>1] · 20ff9ee8
  Paul McCarthy authored 2 years ago and Paul McCarthy committed 1 year ago
  
  20ff9ee8
- MNT: update runEddy script to work with new multi-threaded version. The · 2992cfd1
  Paul McCarthy authored 2 years ago and Paul McCarthy committed 1 year ago
  
  eddy_cpu command is called twice - once with --nthr=1, and again with --nthr=8
  2992cfd1
Mar 17, 2022
- BF: Keep track of which jobs were submitted, so we know what outputs to expect · b05c75a6
  Paul McCarthy authored 3 years ago
  
  View commits for tag 2203.1 2203.1
  
  b05c75a6
- RF: use new fsl_sub syntax · 4f591f23
  Paul McCarthy authored 3 years ago
  
  View commits for tag 2203.0 2203.0
  
  4f591f23
- MNT: Allow fsl_sub to fail, e.g. when trying to run eddy_cuda on a non-cuda · f881b286
  Paul McCarthy authored 3 years ago
  
  machine. Save runEddy output to file so we can inspect it on failures
  f881b286
Nov 25, 2021
- BF: Wrong variable name · 38f8b08e
  Paul McCarthy authored 3 years ago
  
  View commits for tag 2111.0 2111.0
  
  38f8b08e
Nov 24, 2021
- BF: typo · 59def6e8
  Paul McCarthy authored 3 years ago
  
  59def6e8
- BF: Fix var naming bugs by unifying cpu/gpu submit code · 8f8365f0
  Paul McCarthy authored 3 years ago
  
  8f8365f0
- RF: Speed up polling time · 6e26fda4
  Paul McCarthy authored 3 years ago
  
  6e26fda4
- BF: Couple of typos. Check fsl_sub exit code · efd72eb3
  Paul McCarthy authored 3 years ago
  
  efd72eb3
- BF: Fix multi-line strings, wrong var name in runEddy · 5bef154e
  Paul McCarthy authored 3 years ago
  
  5bef154e
- RF: Add feedsInputs/runEddy, should have been in last commit · f90d98ef
  Paul McCarthy authored 3 years ago
  
  f90d98ef
- RF: Major re-arrangement of eddy tests so that job submission / monitoring · 55fe275f
  Paul McCarthy authored 3 years ago
  
  code is shared across all tests in a common "runEddy" script. Also test both $FSLDIR/bin/eddy_openmp and $FSLDIR/bin/eddy_cpu if either exist.
  55fe275f
Nov 23, 2021
- RF: Allow eddy tests to run if eddy_openmp(/eddy_cpu) is not installed. · f8cda2a3
  Paul McCarthy authored 3 years ago
  
  f8cda2a3
Oct 22, 2021
- RF: Put all eddy tests into their own dir · 6b501095
  Paul McCarthy authored 3 years ago
  
  6b501095