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BF: Keep track of which jobs were submitted, so we know what outputs to expect

Merged BF: Keep track of which jobs were submitted, so we know what outputs to expect
bf/eddy into master
Merged Paul McCarthy requested to merge bf/eddy into master
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eddy/feedsRun.EddyLSRTest
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@@ -49,7 +49,7 @@ eddy_args="--imain=${indir}/EddyLSRTestData/eddyData/testData
@@ -49,7 +49,7 @@ eddy_args="--imain=${indir}/EddyLSRTestData/eddyData/testData
--dont_peas --very_verbose"
--dont_peas --very_verbose"
# run eddy
# run eddy
${thisdir}/runEddy ${exedir} ${odir} ${eddy_args} > ${odir}/EddyLSRTest.runEddy.o$$
${thisdir}/runEddy ${exedir} ${odir} ${eddy_args} | tee ${odir}/EddyLSRTest.runEddy.o$$
output_prefixes=$(tail -n1 ${odir}/EddyLSRTest.runEddy.o$$)
output_prefixes=$(tail -n1 ${odir}/EddyLSRTest.runEddy.o$$)