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FSL
win-pytreat
Commits
56b596da
Commit
56b596da
authored
4 years ago
by
Paul McCarthy
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Remove date from readme, change repository URL, note about temp hosting
on github
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56b596da
# 2020 WIN PyTreat
# 2020 WIN PyTreat
This repository contains Jupyter notebooks and data for the
2020
WIN PyTreat.
This repository contains Jupyter notebooks and data for the WIN PyTreat
series
.
It contains the following:
It contains the following:
-
The
`talks`
directory contains
some (but not all) of the
_Topyc_ talks that
-
The
`talks`
directory contains
a series of
_Topyc_ talks that
have been/will
will
be given
throughout the week
.
be given
during the PyTreat
.
-
The
`getting_started`
directory contains a series of practicals intended
-
The
`getting_started`
directory contains a series of practicals intended
for those of you who are new to the Python programming language, or need
for those of you who are new to the Python programming language, or need
...
@@ -16,6 +16,8 @@ It contains the following:
...
@@ -16,6 +16,8 @@ It contains the following:
of you who are familiar with the basics of Python, and want to learn more
of you who are familiar with the basics of Python, and want to learn more
about the language.
about the language.
-
The
`applications`
directory contains a series of practicals which focus
on using Python to accomplish specific tasks.
The practicals have been written under the assumption that FSL 6.0.3 is
The practicals have been written under the assumption that FSL 6.0.3 is
installed.
installed.
...
@@ -28,8 +30,8 @@ These notebooks can be run in the `fslpython` environment using:
...
@@ -28,8 +30,8 @@ These notebooks can be run in the `fslpython` environment using:
```
```
git clone https://git.fmrib.ox.ac.uk/fsl/pytreat
-practicals-2020
.git
git clone https://git.fmrib.ox.ac.uk/fsl/
win-
pytreat.git
cd pytreat
-practicals-2020
cd
win-
pytreat
fslpython -m notebook
fslpython -m notebook
```
```
...
@@ -59,9 +61,13 @@ Have fun!
...
@@ -59,9 +61,13 @@ Have fun!
## For contributors
## For contributors
**IMPORTANT**
Temporarily hosting at https://github.com/pauldmccarthy/win-pytreat, instead
of https://git.fmrib.ox.ac.uk/fsl/win-pytreat
The main repository can be found at:
The main repository can be found at:
https://git.fmrib.ox.ac.uk/fsl/pytreat
-practicals-2020
https://git.fmrib.ox.ac.uk/fsl/
win-
pytreat
Updates to the master branch should occur via merge requests. You can choose
Updates to the master branch should occur via merge requests. You can choose
...
@@ -73,7 +79,7 @@ repository (advanced).
...
@@ -73,7 +79,7 @@ repository (advanced).
1.
Make a local clone of the repository:
1.
Make a local clone of the repository:
```
```
git clone https://git.fmrib.ox.ac.uk/fsl/pytreat
-practicals-2020
.git
git clone https://git.fmrib.ox.ac.uk/fsl/
win-
pytreat.git
```
```
2.
Create a branch for your work:
2.
Create a branch for your work:
...
@@ -108,13 +114,13 @@ repository (advanced).
...
@@ -108,13 +114,13 @@ repository (advanced).
2.
Make a local clone of your fork:
2.
Make a local clone of your fork:
```
```
git clone https://git.fmrib.ox.ac.uk/<your_username>/pytreat
-practicals-2020
.git
git clone https://git.fmrib.ox.ac.uk/<your_username>/
win-
pytreat.git
```
```
3.
Add the upstream repository as a remote:
3.
Add the upstream repository as a remote:
```
```
git remote add upstream https://git.fmrib.ox.ac.uk/fsl/pytreat
-practicals-2020
.git
git remote add upstream https://git.fmrib.ox.ac.uk/fsl/
win-
pytreat.git
```
```
4.
Make your changes on your local repository
4.
Make your changes on your local repository
...
@@ -132,7 +138,7 @@ repository (advanced).
...
@@ -132,7 +138,7 @@ repository (advanced).
6.
In gitlab, submit a merge request from your fork back to the upstream
6.
In gitlab, submit a merge request from your fork back to the upstream
repository.
repository.
https://docs.gitlab.com/ee/user/project/merge_requests/creating_merge_requests.html
https://docs.gitlab.com/ee/user/project/merge_requests/creating_merge_requests.html
...
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