Closed
Milestone expired on Sep 2, 2019

FSL 6.0.2

The current list is:

  • rewrite/debug of low-level newimage code (fixing broken stuff + tidying/improving)

  • FNIRT is still slower in v6 than v5?

  • update Armadillo (requiring re-validation); current version may have a bug in Cholesky decomp

  • BIDS / provenance (revisit what Satra's thing is like) Still relevant for 6.0.2?

  • interactions with Emma R to use her GitHub project version of MSM (plus some FSL library changes, e.g. newmesh)

  • BIDS; x5 is this relevant for 6.0.2 still? Maybe move to 6.0.3?

  • FSL Course computer (laptop); set deadline for changes e.g. May 14

  • debian package (local download, with package manager to check on dependencies, and it sets up the user environment, and deletes appropriate stuff when uninstalling) + some further testing needed

  • ukbbparse

  • fsleyes changes ; BALSA-like scenes Will BALSA scenes be ready for 6.0.2? Maybe this should be pushed back?

  • docker/singularity for open tools moved to its own milestone

  • discourse delayed until FMRIB network works are done

  • transfer to GIT (21 projects to go out of 93); branching strategy to be finalised (currently "GitHub flow") + date-based tags moved to its own milestone

  • adding subclasses for newimage and have things like a mask subclass that enforced it to contain 0's and 1's delayed until 6.0.3

  • killing TCL/TK - new GUIs (modular structure in python) not ready for 6.0.2. Moved to 6.0.4

  • making new tests delayed until 6.0.3

  • killing TCL scripts! rewrite of FEAT moved to 6.0.3

  • DICOM support for XNAT Delayed for later release