FSL 6.0.2
The current list is:
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rewrite/debug of low-level newimage code (fixing broken stuff + tidying/improving)
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FNIRT is still slower in v6 than v5?
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update Armadillo (requiring re-validation); current version may have a bug in Cholesky decomp
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BIDS / provenance (revisit what Satra's thing is like) Still relevant for 6.0.2?
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interactions with Emma R to use her GitHub project version of MSM (plus some FSL library changes, e.g. newmesh)
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BIDS; x5 is this relevant for 6.0.2 still? Maybe move to 6.0.3?
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FSL Course computer (laptop); set deadline for changes e.g. May 14
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debian package (local download, with package manager to check on dependencies, and it sets up the user environment, and deletes appropriate stuff when uninstalling) + some further testing needed
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ukbbparse
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fsleyes changes ; BALSA-like scenes Will BALSA scenes be ready for 6.0.2? Maybe this should be pushed back?
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docker/singularity for open toolsmoved to its own milestone -
discoursedelayed until FMRIB network works are done -
transfer to GIT (21 projects to go out of 93); branching strategy to be finalised (currently "GitHub flow") + date-based tagsmoved to its own milestone -
adding subclasses for newimage and have things like a mask subclass that enforced it to contain 0's and 1'sdelayed until 6.0.3 -
killing TCL/TK - new GUIs (modular structure in python)not ready for 6.0.2. Moved to 6.0.4 -
making new testsdelayed until 6.0.3 -
killing TCL scripts! rewrite of FEATmoved to 6.0.3 -
DICOM support for XNATDelayed for later release