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Michiel Cottaar
fslpy
Commits
27e1ff81
Commit
27e1ff81
authored
8 years ago
by
Paul McCarthy
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Version bump, license tweak, doc fixes.
parent
6106b552
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LICENSE
+1
-1
1 addition, 1 deletion
LICENSE
fsl/data/featanalysis.py
+9
-9
9 additions, 9 deletions
fsl/data/featanalysis.py
fsl/version.py
+1
-1
1 addition, 1 deletion
fsl/version.py
with
11 additions
and
11 deletions
LICENSE
+
1
−
1
View file @
27e1ff81
FSLeyes
, (c) 2016, The University of Oxford (the "Software")
fslpy library
, (c) 2016, The University of Oxford (the "Software")
The Software remains the property of the University of Oxford ("the
University").
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fsl/data/featanalysis.py
+
9
−
9
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27e1ff81
...
...
@@ -471,7 +471,7 @@ def getDataFile(featdir):
"""
Returns the name of the file in the FEAT directory which contains
the model input data (typically called ``filtered_func_data.nii.gz``).
Raises a :exc:`.PathError` if the file does not exist.
Raises a :exc:`
~fsl.utils.path
.PathError` if the file does not exist.
:arg featdir: A FEAT directory.
"""
...
...
@@ -480,11 +480,11 @@ def getDataFile(featdir):
def
getMelodicFile
(
featdir
):
"""
Returns the name of the file in the FEAT results which contains the
melodic
components (if melodic ICA was performed as part of the FEAT
"""
Returns the name of the file in the FEAT results which contains the
melodic
components (if melodic ICA was performed as part of the FEAT
analysis). This file can be loaded as a :class:`.MelodicImage`.
Raises a :exc:`.PathError` if the file does not exist.
Raises a :exc:`
~fsl.utils.path
.PathError` if the file does not exist.
"""
melfile
=
op
.
join
(
featdir
,
'
filtered_func_data.ica
'
,
'
melodic_IC
'
)
return
fslimage
.
addExt
(
melfile
,
mustExist
=
True
)
...
...
@@ -494,7 +494,7 @@ def getResidualFile(featdir):
"""
Returns the name of the file in the FEAT results which contains
the model fit residuals (typically called ``res4d.nii.gz``).
Raises a :exc:`.PathError` if the file does not exist.
Raises a :exc:`
~fsl.utils.path
.PathError` if the file does not exist.
:arg featdir: A FEAT directory.
"""
...
...
@@ -505,7 +505,7 @@ def getResidualFile(featdir):
def
getPEFile
(
featdir
,
ev
):
"""
Returns the path of the PE file for the specified EV.
Raises a :exc:`.PathError` if the file does not exist.
Raises a :exc:`
~fsl.utils.path
.PathError` if the file does not exist.
:arg featdir: A FEAT directory.
:arg ev: The EV number (0-indexed).
...
...
@@ -517,7 +517,7 @@ def getPEFile(featdir, ev):
def
getCOPEFile
(
featdir
,
contrast
):
"""
Returns the path of the COPE file for the specified contrast.
Raises a :exc:`.PathError` if the file does not exist.
Raises a :exc:`
~fsl.utils.path
.PathError` if the file does not exist.
:arg featdir: A FEAT directory.
:arg contrast: The contrast number (0-indexed).
...
...
@@ -529,7 +529,7 @@ def getCOPEFile(featdir, contrast):
def
getZStatFile
(
featdir
,
contrast
):
"""
Returns the path of the Z-statistic file for the specified contrast.
Raises a :exc:`.PathError` if the file does not exist.
Raises a :exc:`
~fsl.utils.path
.PathError` if the file does not exist.
:arg featdir: A FEAT directory.
:arg contrast: The contrast number (0-indexed).
...
...
@@ -541,7 +541,7 @@ def getZStatFile(featdir, contrast):
def
getClusterMaskFile
(
featdir
,
contrast
):
"""
Returns the path of the cluster mask file for the specified contrast.
Raises a :exc:`.PathError` if the file does not exist.
Raises a :exc:`
~fsl.utils.path
.PathError` if the file does not exist.
:arg featdir: A FEAT directory.
:arg contrast: The contrast number (0-indexed).
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fsl/version.py
+
1
−
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View file @
27e1ff81
...
...
@@ -12,5 +12,5 @@ version number and information.
__version__
"""
__version__
=
'
0.9.
7
'
__version__
=
'
0.9.
8
'
"""
Current version number, as a string.
"""
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