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Michiel Cottaar
fslpy
Commits
94f5f898
Commit
94f5f898
authored
9 years ago
by
Paul McCarthy
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Removed some code duplication in FEATTimeSeries
parent
234aa550
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1 changed file
fsl/fslview/views/timeseriespanel.py
+39
-69
39 additions, 69 deletions
fsl/fslview/views/timeseriespanel.py
with
39 additions
and
69 deletions
fsl/fslview/views/timeseriespanel.py
+
39
−
69
View file @
94f5f898
...
@@ -204,7 +204,28 @@ class FEATTimeSeries(TimeSeries):
...
@@ -204,7 +204,28 @@ class FEATTimeSeries(TimeSeries):
con
[
idx
]
=
1
con
[
idx
]
=
1
return
con
return
con
elif
fitType
==
'
cope
'
:
elif
fitType
==
'
cope
'
:
return
self
.
overlay
.
getContrasts
()[
idx
]
return
self
.
overlay
.
contrasts
()[
idx
]
def
__createModelTs
(
self
,
tsType
,
*
args
,
**
kwargs
):
ts
=
tsType
(
self
.
tsPanel
,
self
.
overlay
,
self
.
coords
,
*
args
,
**
kwargs
)
ts
.
alpha
=
self
.
alpha
ts
.
label
=
self
.
label
ts
.
lineWidth
=
self
.
lineWidth
ts
.
lineStyle
=
self
.
lineStyle
if
isinstance
(
ts
,
FEATReducedTimeSeries
):
ts
.
colour
=
(
0
,
0.6
,
0.6
)
elif
isinstance
(
ts
,
FEATResidualTimeSeries
):
ts
.
colour
=
(
0.8
,
0.4
,
0
)
elif
isinstance
(
ts
,
FEATModelFitTimeSeries
):
if
ts
.
fitType
==
'
full
'
:
ts
.
colour
=
(
0
,
0
,
1
)
elif
ts
.
fitType
==
'
cope
'
:
ts
.
colour
=
(
0
,
1
,
0
)
elif
ts
.
fitType
==
'
pe
'
:
ts
.
colour
=
(
0.7
,
0
,
0
)
return
ts
def
__plotReducedChanged
(
self
,
*
a
):
def
__plotReducedChanged
(
self
,
*
a
):
...
@@ -221,21 +242,11 @@ class FEATTimeSeries(TimeSeries):
...
@@ -221,21 +242,11 @@ class FEATTimeSeries(TimeSeries):
fitType
=
reduced
[:
-
1
].
lower
()
fitType
=
reduced
[:
-
1
].
lower
()
idx
=
int
(
reduced
[
-
1
])
-
1
idx
=
int
(
reduced
[
-
1
])
-
1
rts
=
FEATReducedTimeSeries
(
self
.
__reducedTs
=
self
.
__createModelTs
(
FEATReducedTimeSeries
,
self
.
__getContrast
(
fitType
,
idx
),
self
.
__getContrast
(
fitType
,
idx
),
fitType
,
fitType
,
idx
,
idx
)
self
.
tsPanel
,
self
.
overlay
,
self
.
coords
)
rts
.
colour
=
(
0
,
0.6
,
0.6
)
rts
.
alpha
=
self
.
alpha
rts
.
label
=
self
.
label
rts
.
lineWidth
=
self
.
lineWidth
rts
.
lineStyle
=
self
.
lineStyle
self
.
__reducedTs
=
rts
def
__plotResidualsChanged
(
self
,
*
a
):
def
__plotResidualsChanged
(
self
,
*
a
):
...
@@ -244,18 +255,7 @@ class FEATTimeSeries(TimeSeries):
...
@@ -244,18 +255,7 @@ class FEATTimeSeries(TimeSeries):
self
.
__resTs
=
None
self
.
__resTs
=
None
return
return
rts
=
FEATResidualTimeSeries
(
self
.
__resTs
=
self
.
__createModelTs
(
FEATResidualTimeSeries
)
self
.
tsPanel
,
self
.
overlay
,
self
.
coords
)
rts
.
colour
=
(
0.8
,
0.4
,
0
)
rts
.
alpha
=
self
.
alpha
rts
.
label
=
self
.
label
rts
.
lineWidth
=
self
.
lineWidth
rts
.
lineStyle
=
self
.
lineStyle
self
.
__resTs
=
rts
def
__plotCOPEFitChanged
(
self
,
copenum
):
def
__plotCOPEFitChanged
(
self
,
copenum
):
...
@@ -264,21 +264,11 @@ class FEATTimeSeries(TimeSeries):
...
@@ -264,21 +264,11 @@ class FEATTimeSeries(TimeSeries):
self
.
__copeTs
[
copenum
]
=
None
self
.
__copeTs
[
copenum
]
=
None
return
return
copets
=
FEATModelFitTimeSeries
(
self
.
__copeTs
[
copenum
]
=
self
.
__createModelTs
(
FEATModelFitTimeSeries
,
self
.
__getContrast
(
'
cope
'
,
copenum
),
self
.
__getContrast
(
'
cope
'
,
copenum
),
'
cope
'
,
'
cope
'
,
copenum
,
copenum
)
self
.
tsPanel
,
self
.
overlay
,
self
.
coords
)
copets
.
colour
=
(
0
,
1
,
0
)
copets
.
alpha
=
self
.
alpha
copets
.
label
=
self
.
label
copets
.
lineWidth
=
self
.
lineWidth
copets
.
lineStyle
=
self
.
lineStyle
self
.
__copeTs
[
copenum
]
=
copets
def
__plotPEFitChanged
(
self
,
evnum
):
def
__plotPEFitChanged
(
self
,
evnum
):
...
@@ -287,21 +277,11 @@ class FEATTimeSeries(TimeSeries):
...
@@ -287,21 +277,11 @@ class FEATTimeSeries(TimeSeries):
self
.
__peTs
[
evnum
]
=
None
self
.
__peTs
[
evnum
]
=
None
return
return
pets
=
FEATModelFitTimeSeries
(
self
.
__peTs
[
evnum
]
=
self
.
__createModelTs
(
FEATModelFitTimeSeries
,
self
.
__getContrast
(
'
pe
'
,
evnum
),
self
.
__getContrast
(
'
pe
'
,
evnum
),
'
pe
'
,
'
pe
'
,
evnum
,
evnum
)
self
.
tsPanel
,
self
.
overlay
,
self
.
coords
)
pets
.
colour
=
(
0.7
,
0
,
0
)
pets
.
alpha
=
self
.
alpha
pets
.
label
=
self
.
label
pets
.
lineWidth
=
self
.
lineWidth
pets
.
lineStyle
=
self
.
lineStyle
self
.
__peTs
[
evnum
]
=
pets
def
__plotFullModelFitChanged
(
self
,
*
a
):
def
__plotFullModelFitChanged
(
self
,
*
a
):
...
@@ -310,21 +290,11 @@ class FEATTimeSeries(TimeSeries):
...
@@ -310,21 +290,11 @@ class FEATTimeSeries(TimeSeries):
self
.
__fullModelTs
=
None
self
.
__fullModelTs
=
None
return
return
fts
=
FEATModelFitTimeSeries
(
self
.
__fullModelTs
=
self
.
__createModelTs
(
FEATModelFitTimeSeries
,
self
.
__getContrast
(
'
full
'
,
-
1
),
self
.
__getContrast
(
'
full
'
,
-
1
),
'
full
'
,
'
full
'
,
-
1
,
-
1
)
self
.
tsPanel
,
self
.
overlay
,
self
.
coords
)
fts
.
colour
=
(
0
,
0
,
1
)
fts
.
alpha
=
self
.
alpha
fts
.
label
=
self
.
label
fts
.
lineWidth
=
self
.
lineWidth
fts
.
lineStyle
=
self
.
lineStyle
self
.
__fullModelTs
=
fts
def
update
(
self
,
coords
):
def
update
(
self
,
coords
):
...
@@ -341,8 +311,8 @@ class FEATTimeSeries(TimeSeries):
...
@@ -341,8 +311,8 @@ class FEATTimeSeries(TimeSeries):
class
FEATReducedTimeSeries
(
TimeSeries
):
class
FEATReducedTimeSeries
(
TimeSeries
):
def
__init__
(
self
,
contrast
,
fitType
,
idx
,
*
args
,
**
kwargs
):
def
__init__
(
self
,
tsPanel
,
overlay
,
coords
,
contrast
,
fitType
,
idx
):
TimeSeries
.
__init__
(
self
,
*
args
,
**
kwarg
s
)
TimeSeries
.
__init__
(
self
,
tsPanel
,
overlay
,
coord
s
)
self
.
contrast
=
contrast
self
.
contrast
=
contrast
self
.
fitType
=
fitType
self
.
fitType
=
fitType
...
@@ -364,12 +334,12 @@ class FEATResidualTimeSeries(TimeSeries):
...
@@ -364,12 +334,12 @@ class FEATResidualTimeSeries(TimeSeries):
class
FEATModelFitTimeSeries
(
TimeSeries
):
class
FEATModelFitTimeSeries
(
TimeSeries
):
def
__init__
(
self
,
contrast
,
fitType
,
idx
,
*
args
,
**
kwargs
):
def
__init__
(
self
,
tsPanel
,
overlay
,
coords
,
contrast
,
fitType
,
idx
):
if
fitType
not
in
(
'
full
'
,
'
cope
'
,
'
pe
'
):
if
fitType
not
in
(
'
full
'
,
'
cope
'
,
'
pe
'
):
raise
ValueError
(
'
Unknown model fit type {}
'
.
format
(
fitType
))
raise
ValueError
(
'
Unknown model fit type {}
'
.
format
(
fitType
))
TimeSeries
.
__init__
(
self
,
*
args
,
**
kwarg
s
)
TimeSeries
.
__init__
(
self
,
tsPanel
,
overlay
,
coord
s
)
self
.
fitType
=
fitType
self
.
fitType
=
fitType
self
.
idx
=
idx
self
.
idx
=
idx
self
.
contrast
=
contrast
self
.
contrast
=
contrast
...
...
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