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Commit d3a75ad7 authored by Paul McCarthy's avatar Paul McCarthy
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New Nifti methods to return xyzt unit codes - nibabel returns labels, but I

want the raw codes.
parent b5f7caa3
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...@@ -42,7 +42,6 @@ import numpy as np ...@@ -42,7 +42,6 @@ import numpy as np
import nibabel as nib import nibabel as nib
import nibabel.fileslice as fileslice import nibabel.fileslice as fileslice
import fsl.utils.transform as transform import fsl.utils.transform as transform
import fsl.utils.notifier as notifier import fsl.utils.notifier as notifier
import fsl.utils.memoize as memoize import fsl.utils.memoize as memoize
...@@ -314,6 +313,29 @@ class Nifti(notifier.Notifier): ...@@ -314,6 +313,29 @@ class Nifti(notifier.Notifier):
return self.__intent return self.__intent
@property
def xyzUnits(self):
"""Returns the NIFTI XYZ dimension unit code. """
# The nibabel get_xyzt_units returns labels,
# but we want the NIFTI codes. So we use
# the (undocumented) nifti1.unit_codes field
# to convert back to the raw codes.
xyzUnits = self.header.get_xyzt_units()[0]
xyzUnits = nib.nifti1.unit_codes[xyzUnits]
return xyzUnits
def timeUnits(self):
"""Returns the NIFTI time dimension unit code. """
# See xyzUnits
timeUnits = self.header.get_xyzt_units()[1]
timeUnits = nib.nifti1.unit_codes[timeUnits]
return timeUnits
@property @property
def worldToVoxMat(self): def worldToVoxMat(self):
"""Returns a ``numpy`` array of shape ``(4, 4)`` containing an """Returns a ``numpy`` array of shape ``(4, 4)`` containing an
......
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