Commits · master · Michiel Cottaar / fslpy

Jun 15, 2022
- Merge branch 'enh/fslmaths-roi' into 'master' · 6591fca6
  Paul McCarthy authored 2 years ago
  
  Enh/fslmaths roi See merge request fsl/fslpy!346
  6591fca6
- DOC: changelog · dc44b462
  Paul McCarthy authored 2 years ago
  
  dc44b462
- TEST: test fslmaths -roi · 176763a2
  Paul McCarthy authored 2 years ago
  
  176763a2
- ENH: add -roi flag to fslmaths wrapper · 56854d18
  Paul McCarthy authored 2 years ago
  
  56854d18
Jun 02, 2022
- Merge branch 'doc/date' into 'master' · 0f917661
  Paul McCarthy authored 2 years ago
  
  DOC: fix date See merge request fsl/fslpy!344
  0f917661
- DOC: fix date · c1f05381
  Paul McCarthy authored 2 years ago
  
  c1f05381
- Merge branch 'mnt/wrapper-pathlib' into 'master' · 973b8cdf
  Paul McCarthy authored 2 years ago
  
  Mnt/wrapper pathlib Closes #379 and #380 See merge request fsl/fslpy!343
  973b8cdf
- DOC: Note on Windows/WSL paths · 7160facc
  Paul McCarthy authored 2 years ago
  
  7160facc
- DOC: Changelog · 51f7c107
  Paul McCarthy authored 2 years ago
  
  51f7c107
- TEST: Another wrapper+pathlib test · 387da90e
  Paul McCarthy authored 2 years ago
  
  387da90e
- MNT: Convert all Path arguments to absolute path strings · c3e50e94
  Paul McCarthy authored 2 years ago
  
  c3e50e94
- DOC: changelog · 759da952
  Paul McCarthy authored 2 years ago
  
  759da952
- TEST: Test pathlib support · c9d7fff5
  Paul McCarthy authored 2 years ago
  
  c9d7fff5
- MNT: Update ensureIsImage and FileOrThing(outprefix) to accept pathlib.Path · a428c3e1
  Paul McCarthy authored 2 years ago
  
  a428c3e1
May 27, 2022
- Merge branch 'rf/force-load' into 'master' · cfbbd146
  Paul McCarthy authored 2 years ago
  
  Rf/force load See merge request fsl/fslpy!341
  cfbbd146
- DOC: Changelog · f86d5d96
  Paul McCarthy authored 2 years ago
  
  f86d5d96
- RF: Force-load image data when a fancy slice object is used · e8501fc8
  Paul McCarthy authored 2 years ago
  
  e8501fc8
May 26, 2022
- Merge branch 'fix_dill' into 'master' · 432d73be
  Paul McCarthy authored 2 years ago
  
  Add recurse flag to dill dump See merge request fsl/fslpy!339
  432d73be
- DOC: changelog · 22cba1ff
  Paul McCarthy authored 2 years ago
  
  22cba1ff
- Add recurse flag to dill dump · dd939b97
  Michiel Cottaar authored 2 years ago
  
  This ensures that the scope of the function is actually saved.
  dd939b97
- Remove unused test · 7e6e4954
  Michiel Cottaar authored 2 years ago
  
  7e6e4954
May 19, 2022
- Merge branch 'rf/nifti-xform-template-other' into 'master' · a187f9cd
  Paul McCarthy authored 2 years ago
  
  Rf/nifti xform template other See merge request fsl/fslpy!337
  a187f9cd
- DOC: changelog · 06b64a05
  Paul McCarthy authored 2 years ago
  
  06b64a05
- RF: Add support for NIFTI_TEMPLATE_XFORM_OTHER code. · 42441af2
  Paul McCarthy authored 2 years ago
  
  42441af2
May 13, 2022
- Merge branch 'bf/wrapper-singlechar-args' into 'master' · 5851e4c0
  Paul McCarthy authored 2 years ago
  
  RF: New options to applyArgStyle See merge request fsl/fslpy!335
  5851e4c0
- DOC: changelog · 169e2a66
  Paul McCarthy authored 2 years ago
  
  169e2a66
- RF: Use shlex.join if available (py>=3.8) · 01a6c490
  Paul McCarthy authored 2 years ago
  
  01a6c490
- TEST: test single-char args in fast wrapper · 7f44ac2e
  Paul McCarthy authored 2 years ago
  
  7f44ac2e
- RF: Make style param default to '--=' - default settings will generate · aa1fef99
  Paul McCarthy authored 2 years ago
  
  UNIX style arguments
  aa1fef99
May 12, 2022

RF: New options to applyArgStyle to handle commands which mostly use the · 37fe9592

Paul McCarthy authored 2 years ago

standard --arg=val style, but also have short options which do not have a long
equivalent *and* which may expect multiple arguments (e.g. -A one two three) .
Definitely feels like over-engineering, but when style="--=", all other
arguments are set to sensible defaults.

37fe9592

Apr 12, 2022
- Merge branch 'test/atlases' into 'master' · 281160db
  Paul McCarthy authored 2 years ago
  
  Test/atlases See merge request fsl/fslpy!333
  281160db
- DOC: changelog · 75ad0dcb
  Paul McCarthy authored 2 years ago
  
  75ad0dcb
- RF: Force-load atlas image into memory on mask-based query · 1c459d8f
  Paul McCarthy authored 2 years ago
  
  1c459d8f
Apr 11, 2022
- Merge branch 'test/atlases' into 'master' · 5c4f055a
  Paul McCarthy authored 2 years ago
  
  TEST: force-load some atlases See merge request fsl/fslpy!331
  5c4f055a
- TEST: force-load some atlases · d7d111f2
  Paul McCarthy authored 2 years ago
  
  d7d111f2
- Merge branch 'mnt/release' into 'master' · de2d2160
  Paul McCarthy authored 2 years ago
  
  Mnt/release See merge request fsl/fslpy!329
  de2d2160
- MNT: pre-release version bump · b29c2a05
  Paul McCarthy authored 2 years ago
  
  b29c2a05
- DOC: changelog · b55302b8
  Paul McCarthy authored 2 years ago
  
  b55302b8
- Merge branch 'rf/disable-imagewrapper' into 'master' · a0277e33
  Paul McCarthy authored 2 years ago
  
  RF: Remove ImageWrapper See merge request fsl/fslpy!327
  a0277e33
- DOC: mention always 3D · 105436c7
  Paul McCarthy authored 2 years ago
  
  105436c7