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Created with Raphaël 2.2.07Sep15Aug32131Jul181713109824Jun31May3028271132130Apr2726252019181719Mar12628Feb271298765231Jan3029262524232119171615141211109214Dec13108754130Nov98732127Oct2524232119181312TEST: Test saving mem-mapped imagesRF: Don't try and save over a memory-mapped image fileTEST: Unit test for expectedShapeBF: Allow open slice endingsHandle conflicts in output where two outputs have the same name (without file extension)ref is not compulsary in fnirt if you are using the --config optionMerge branch 'rf/windows_compat' into 'master'TEST: Fix windows edge case where test data is on different drive to tempdirDOC: Extremely optimistic changes to changelogTEST: More making sure images/file handles are GC'dRF,BF: FEATImage.getCOPE was loading PE image. Clear refs to images on delete.RF: Don't keep file handles open, clear image referencesExplicitly do not memmap, otherwise windows has trouble closing file handles.TEST: Windows compatibilityRF: Windows compatibilityMake 'warp' an optional parameter - applywarp can be used to just apply affine transformationsMerge branch 'mnt/verbump' into 'master'TEST: Some pytest configurations complain about pytest.raises arguments notMerge branch 'mnt/verbump' into 'master'MNT: Post-release version bumpMNT: Update conda post-linkMerge branch 'enh/wrappers' into 'master'DOC: Changelog with optimistic release date and API docsDOC: Fix sphinx typosSpecial case to handle 'centre' argument for BET since this needs to beOOPS: Accidentally committed incomplete mergeFix boolean options for FAST wrapperMerge branch 'enh/wrappers' into mscMake log key 'cmd' into a stream rather than a booleanMinor tweak: Only return images that exist in the outputArguments given as None are ignoredSend command output to streams in real timeSearch for command in all configured FSL locationsRemove all standard keyword argument and pass them to the run function separatelyAllow subclasses of Image (and Nifti1Image) to be passed as parametersAdd singlechar_args option to applyArgStyle for standard handling of single-char argumentsAdd kwargs to applyxfm wrapper - required for logging optionsRF, STY: Improved mcflirt wrapper.RF: Output prefix logic now working with chained decoratorsTEST: Extend tests for chained decorators