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Michiel Cottaar
MRIBuilder.jl
Commits
902e2976
Verified
Commit
902e2976
authored
1 year ago
by
Michiel Cottaar
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Set \Delta to by synonym of diffusion_time
parent
05a6c949
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2 changed files
src/MRIBuilder.jl
+2
-2
2 additions, 2 deletions
src/MRIBuilder.jl
src/variables.jl
+4
-2
4 additions, 2 deletions
src/variables.jl
with
6 additions
and
4 deletions
src/MRIBuilder.jl
+
2
−
2
View file @
902e2976
...
...
@@ -19,8 +19,8 @@ export build_sequence, global_model, global_scanner, fixed
import
.
Scanners
:
Scanner
,
B0
,
Siemens_Connectom
,
Siemens_Prisma
,
Siemens_Terra
export
Scanner
,
B0
,
Siemens_Connectom
,
Siemens_Prisma
,
Siemens_Terra
import
.
Variables
:
variables
,
duration
,
effective_time
,
flip_angle
,
amplitude
,
phase
,
frequency
,
bandwidth
,
N_left
,
N_right
,
qval
,
δ
,
rise_time
,
flat_time
,
slew_rate
,
gradient_strength
,
qvec
,
qval_square
,
slice_thickness
,
inverse_slice_thickness
,
fov
,
inverse_fov
,
voxel_size
,
inverse_voxel_size
,
resolution
,
nsamples
,
oversample
,
dwell_time
,
ramp_overlap
,
spoiler_scale
,
repetition_time
,
TR
,
Δ
,
get_gradient
,
get_pulse
,
get_readout
,
TE
,
echo_time
export
variables
,
duration
,
effective_time
,
flip_angle
,
amplitude
,
phase
,
frequency
,
bandwidth
,
N_left
,
N_right
,
qval
,
δ
,
rise_time
,
flat_time
,
slew_rate
,
gradient_strength
,
qvec
,
qval_square
,
slice_thickness
,
inversne_slice_thickness
,
fov
,
inverse_fov
,
voxel_size
,
inverse_voxel_size
,
resolution
,
nsamples
,
oversample
,
dwell_time
,
ramp_overlap
,
spoiler_scale
,
repetition_time
,
TR
,
Δ
,
get_gradient
,
get_pulse
,
get_readout
,
TE
,
echo_time
import
.
Variables
:
variables
,
duration
,
effective_time
,
flip_angle
,
amplitude
,
phase
,
frequency
,
bandwidth
,
N_left
,
N_right
,
qval
,
δ
,
rise_time
,
flat_time
,
slew_rate
,
gradient_strength
,
qvec
,
qval_square
,
slice_thickness
,
inverse_slice_thickness
,
fov
,
inverse_fov
,
voxel_size
,
inverse_voxel_size
,
resolution
,
nsamples
,
oversample
,
dwell_time
,
ramp_overlap
,
spoiler_scale
,
repetition_time
,
TR
,
Δ
,
get_gradient
,
get_pulse
,
get_readout
,
TE
,
echo_time
,
diffusion_time
export
variables
,
duration
,
effective_time
,
flip_angle
,
amplitude
,
phase
,
frequency
,
bandwidth
,
N_left
,
N_right
,
qval
,
δ
,
rise_time
,
flat_time
,
slew_rate
,
gradient_strength
,
qvec
,
qval_square
,
slice_thickness
,
inversne_slice_thickness
,
fov
,
inverse_fov
,
voxel_size
,
inverse_voxel_size
,
resolution
,
nsamples
,
oversample
,
dwell_time
,
ramp_overlap
,
spoiler_scale
,
repetition_time
,
TR
,
Δ
,
get_gradient
,
get_pulse
,
get_readout
,
TE
,
echo_time
,
diffusion_time
import
.
Components
:
InstantPulse
,
ConstantPulse
,
SincPulse
,
GenericPulse
,
InstantGradient
,
SingleReadout
,
ADC
export
InstantPulse
,
ConstantPulse
,
SincPulse
,
GenericPulse
,
InstantGradient
,
SingleReadout
,
ADC
...
...
This diff is collapsed.
Click to expand it.
src/variables.jl
+
4
−
2
View file @
902e2976
...
...
@@ -38,7 +38,8 @@ all_variables_symbols = [
:
repetition_time
=>
"Time on which an MRI sequence repeats itself in ms."
,
:
TE
=>
"Echo time of the sequence in ms. Defaults to the result of [`echo_time`](@ref)."
,
:
echo_time
=>
"Echo time of the sequence in ms."
,
:
Δ
=>
"Diffusion time in ms (i.e., time between start of the diffusion-weighted gradients)."
,
:
diffusion_time
=>
"Diffusion time in ms (i.e., time between start of the diffusion-weighted gradients)."
,
:
Δ
=>
"Diffusion time in ms (i.e., time between start of the diffusion-weighted gradients). Defaults to the result of [`diffusion_time`](@ref)."
,
:
qvec
=>
"Net dephasing due to gradients in rad/um."
,
:
area_under_curve
=>
"Net dephasing due to gradients in rad/um (same as [`qvec`](@ref))."
,
:
bmat
=>
"Full 3x3 diffusion-weighting matrix in ms/um^2."
,
...
...
@@ -104,6 +105,7 @@ end
TE
(
ab
::
AbstractBlock
)
=
echo_time
(
ab
)
TR
(
ab
::
AbstractBlock
)
=
repetition_time
(
ab
)
Δ
(
ab
::
AbstractBlock
)
=
diffusion_time
(
ab
)
"""
Dictionary with alternative versions of specific function.
...
...
@@ -235,7 +237,7 @@ end
for
(
target_name
,
all_vars
)
in
all_variables_symbols
for
(
variable_func
,
_
)
in
all_vars
if
variable_func
in
[
:
qval3
,
:
TR
,
:
TE
]
if
variable_func
in
[
:
qval3
,
:
TR
,
:
TE
,
:
Δ
]
continue
end
get_func
=
Symbol
(
"get_"
*
string
(
target_name
))
...
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