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Define variables through new @defvar macro

Merged Define variables through new @defvar macro
new_variables into main
Merged Michiel Cottaar requested to merge new_variables into main
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src/MRIBuilder.jl
+ 27
− 27
@@ -6,15 +6,15 @@ module MRIBuilder
include("scanners.jl")
include("build_sequences.jl")
include("variables.jl")
include("components/components.jl")
include("containers/containers.jl")
include("pathways.jl")
include("parts/parts.jl")
include("post_hoc.jl")
include("sequences/sequences.jl")
include("printing.jl")
include("sequence_io/sequence_io.jl")
include("plot.jl")
#include("components/components.jl")
#include("containers/containers.jl")
#include("pathways.jl")
#include("parts/parts.jl")
#include("post_hoc.jl")
#include("sequences/sequences.jl")
#include("printing.jl")
#include("sequence_io/sequence_io.jl")
#include("plot.jl")
import .BuildSequences: build_sequence, global_model, global_scanner, fixed
export build_sequence, global_model, global_scanner, fixed
@@ -25,31 +25,31 @@ export Scanner, B0, Siemens_Connectom, Siemens_Prisma, Siemens_Terra, Default_Sc
import .Variables: variables, duration, effective_time, flip_angle, amplitude, phase, frequency, bandwidth, N_left, N_right, qval, δ, rise_time, flat_time, slew_rate, gradient_strength, qvec, qval_square, slice_thickness, inverse_slice_thickness, fov, inverse_fov, voxel_size, inverse_voxel_size, resolution, nsamples, oversample, dwell_time, ramp_overlap, spoiler_scale, repetition_time, TR, Δ, get_gradient, get_pulse, get_readout, TE, echo_time, diffusion_time, make_generic, slew_rate3, gradient_strength3, qval3
export variables, duration, effective_time, flip_angle, amplitude, phase, frequency, bandwidth, N_left, N_right, qval, δ, rise_time, flat_time, slew_rate, gradient_strength, qvec, qval_square, slice_thickness, inversne_slice_thickness, fov, inverse_fov, voxel_size, inverse_voxel_size, resolution, nsamples, oversample, dwell_time, ramp_overlap, spoiler_scale, repetition_time, TR, Δ, get_gradient, get_pulse, get_readout, TE, echo_time, diffusion_time, make_generic, slew_rate3, gradient_strength3, qval3
import .Components: InstantPulse, ConstantPulse, SincPulse, GenericPulse, InstantGradient, SingleReadout, ADC, CompositePulse, edge_times
export InstantPulse, ConstantPulse, SincPulse, GenericPulse, InstantGradient, SingleReadout, ADC, CompositePulse, edge_times
#import .Components: InstantPulse, ConstantPulse, SincPulse, GenericPulse, InstantGradient, SingleReadout, ADC, CompositePulse, edge_times
#export InstantPulse, ConstantPulse, SincPulse, GenericPulse, InstantGradient, SingleReadout, ADC, CompositePulse, edge_times
import .Containers: ContainerBlock, start_time, end_time, waveform, waveform_sequence, events, BaseBuildingBlock, BuildingBlock, Wait, BaseSequence, nrepeat, Sequence, AlternativeBlocks, match_blocks!, get_index_single_TR, readout_times, iter_blocks, iter_instant_gradients, iter_instant_pulses
export ContainerBlock, start_time, end_time, waveform, waveform_sequence, events, BaseBuildingBlock, BuildingBlock, Wait, BaseSequence, nrepeat, Sequence, AlternativeBlocks, match_blocks!, get_index_single_TR, readout_times, iter_blocks, iter_instant_gradients, iter_instant_pulses
#import .Containers: ContainerBlock, start_time, end_time, waveform, waveform_sequence, events, BaseBuildingBlock, BuildingBlock, Wait, BaseSequence, nrepeat, Sequence, AlternativeBlocks, match_blocks!, get_index_single_TR, readout_times, iter_blocks, iter_instant_gradients, iter_instant_pulses
#export ContainerBlock, start_time, end_time, waveform, waveform_sequence, events, BaseBuildingBlock, BuildingBlock, Wait, BaseSequence, nrepeat, Sequence, AlternativeBlocks, match_blocks!, get_index_single_TR, readout_times, iter_blocks, iter_instant_gradients, iter_instant_pulses
import .Pathways: Pathway, duration_transverse, duration_dephase, bval, bmat, get_pathway
export Pathway, duration_transverse, duration_dephase, bval, bmat, get_pathway
#import .Pathways: Pathway, duration_transverse, duration_dephase, bval, bmat, get_pathway
#export Pathway, duration_transverse, duration_dephase, bval, bmat, get_pathway
import .Parts: dwi_gradients, readout_event, excitation_pulse, refocus_pulse, Trapezoid, SliceSelect, LineReadout, opposite_kspace_lines, SpoiltSliceSelect, SliceSelectRephase, EPIReadout, interpret_image_size
export dwi_gradients, readout_event, excitation_pulse, refocus_pulse, Trapezoid, SliceSelect, LineReadout, opposite_kspace_lines, SpoiltSliceSelect, SliceSelectRephase, EPIReadout, interpret_image_size
#import .Parts: dwi_gradients, readout_event, excitation_pulse, refocus_pulse, Trapezoid, SliceSelect, LineReadout, opposite_kspace_lines, SpoiltSliceSelect, SliceSelectRephase, EPIReadout, interpret_image_size
#export dwi_gradients, readout_event, excitation_pulse, refocus_pulse, Trapezoid, SliceSelect, LineReadout, opposite_kspace_lines, SpoiltSliceSelect, SliceSelectRephase, EPIReadout, interpret_image_size
import .PostHoc: adjust, merge_sequences
export adjust, merge_sequences
#import .PostHoc: adjust, merge_sequences
#export adjust, merge_sequences
import .Sequences: GradientEcho, SpinEcho, DiffusionSpinEcho, DW_SE, DWI
export GradientEcho, SpinEcho, DiffusionSpinEcho, DW_SE, DWI
#import .Sequences: GradientEcho, SpinEcho, DiffusionSpinEcho, DW_SE, DWI
#export GradientEcho, SpinEcho, DiffusionSpinEcho, DW_SE, DWI
import .SequenceIO: read_sequence, write_sequence
export read_sequence, write_sequence
#import .SequenceIO: read_sequence, write_sequence
#export read_sequence, write_sequence
import .Plot: plot_sequence
export plot_sequence
#import .Plot: plot_sequence
#export plot_sequence
import JuMP: @constraint, @objective, objective_function, value, Model
export @constraint, @objective, objective_function, value, Model
#import JuMP: @constraint, @objective, objective_function, value, Model
#export @constraint, @objective, objective_function, value, Model
end