replace github.io links

README.md

@@ -36,7 +36,7 @@ Alongside the hacks, we will develop the WIN Open Ambassadors program, where mot
 
 ### Why here?
 
-We are building our resources and documenting our growth using this version controlled git repository, rendered into an accessible "book" format. Using git makes it easy to review and accept contributions and flexibly update with a full history of activity. It also provides a starting point for researchers who are unfamiliar with git to practice contributing to a repository and gain confidence using the git process. This is an essential skill in open and reproducible research, an excellent skill to have on your CV, and one which will be vital to using some parts of the WIN Open Infrastructure. We are therefore pleased to offer all our contributors training and support in git throughout their engagement with the project. You will find training and linked resources for using git in our [contributing guide](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/CONTRIBUTING.html).
+We are building our resources and documenting our growth using this version controlled git repository, rendered into an accessible "book" format. Using git makes it easy to review and accept contributions and flexibly update with a full history of activity. It also provides a starting point for researchers who are unfamiliar with git to practice contributing to a repository and gain confidence using the git process. This is an essential skill in open and reproducible research, an excellent skill to have on your CV, and one which will be vital to using some parts of the WIN Open Infrastructure. We are therefore pleased to offer all our contributors training and support in git throughout their engagement with the project. You will find training and linked resources for using git in our [contributing guide](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/CONTRIBUTING.html).
 
 ## Who are we?
 
@@ -71,7 +71,7 @@ Your name and image here!
 
 ## What do we need?
 
-**You**! We need people to join the community! If you would like to learn more about open research, become an [Ambassador](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/ambassadors.html) or join one of our hacks, please join the WIN Open Neuroimaging Project [mailing list](https://mail.fmrib.ox.ac.uk/mailman/listinfo/win-open-imaging), and stay tuned for further announcements. We will be putting out a call in the near future, with an official invitation to the community, more information about what will be involved and what is in it for you!
+**You**! We need people to join the community! If you would like to learn more about open research, become an [Ambassador](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/ambassadors.html) or join one of our hacks, please join the WIN Open Neuroimaging Project [mailing list](https://mail.fmrib.ox.ac.uk/mailman/listinfo/win-open-imaging), and stay tuned for further announcements. We will be putting out a call in the near future, with an official invitation to the community, more information about what will be involved and what is in it for you!
 
 Please note that it's very important to us that we maintain a positive and supportive environment for everyone who wants to participate. When you join us we ask that you follow our [code of conduct](/docs/CODE_OF_CONDUCT.md) in all interactions both on and offline.
 
@@ -92,7 +92,7 @@ You might be interested in:
 
 And of course, you'll want to know our:
 
-* [Contributors' guidelines](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/CONTRIBUTING.html)
+* [Contributors' guidelines](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/CONTRIBUTING.html)
 
 
 

docs/CONTRIBUTING.md

@@ -20,7 +20,7 @@ We want to ensure that every user and contributor feels welcome and included in
 Please follow these guidelines to make sure your contributions can be easily integrated in the projects. As you start contributing to the WIN Open Neuroimaging, don't forget that your ideas are more important than perfect [pull requests](https://opensource.stackexchange.com/questions/352/what-exactly-is-a-pull-request).
 
 ## 1. Contact us
-In the first instance, we encourage you [connect with the Open WIN Community](contact.md). Let us know that you are reading the repository and you would like to contribute! You might like to introduce yourself on the #welcome channel on our [Slack workspace](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/contact.html#open-win-slack-)! 👋
+In the first instance, we encourage you [connect with the Open WIN Community](contact.md). Let us know that you are reading the repository and you would like to contribute! You might like to introduce yourself on the #welcome channel on our [Slack workspace](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/contact.html#open-win-slack-)! 👋
 
 ## 2. Check what we're working on
 
@@ -31,7 +31,7 @@ We also invite you to review our [roadmap](community/roadmap.md) and see how we
 ## 3. Join us at a documentation hack!
 We will be holding regular "documentation hacks", where you will be guided through the process of contributing to the repository, and can participate in a git tutorial if you'd benefit from this. Take a look at our [events page](events.md) to find out when the next documentation hack will be held.
 
-At the documentation hack, you will hear from members of the [Open Neuroimaging Project Working Groups](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/community/community-who.html#win-open-neuroimaging-working-group) and learn about the progress of each tool. You will learn how to use each tool, be invited to contribute feedback to the tool developers, and invited to write "how to" guides to walk novice users through the process of shearing their research outputs using the [Open WIN Tools](tools.md).
+At the documentation hack, you will hear from members of the [Open Neuroimaging Project Working Groups](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/community/community-who.html#win-open-neuroimaging-working-group) and learn about the progress of each tool. You will learn how to use each tool, be invited to contribute feedback to the tool developers, and invited to write "how to" guides to walk novice users through the process of shearing their research outputs using the [Open WIN Tools](tools.md).
 
 We will also use the documentation hacks to plan as a community, learn about what policy or guidance we need to support working open at WIN, and think about how we would like to develop. This will include community-led planning of the [Open WIN Ambassadors scheme](ambassadors.md).
 

docs/community.md

@@ -26,10 +26,10 @@ We are committed to supporting transparent and reproducible research practices w
 
 If you are interested in learning more about open research, incorporating open research practices in your research, or developing resources to make open research at WIN easier and well incentivised, you should be  member of our community!
 
-👋 Subscribe to the [Open WIN mailing list](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/contact.html#open-win-mailing-list-) to find out about events and resources as they are shared.
+👋 Subscribe to the [Open WIN mailing list](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/contact.html#open-win-mailing-list-) to find out about events and resources as they are shared.
 
-👋 Say "hello" on our [Slack workspace](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/contact.html#open-win-slack-) to follow and contribute to discussions about the [Open WIN Tools](tools.md), [events](events.md) or plans for the community.
+👋 Say "hello" on our [Slack workspace](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/contact.html#open-win-slack-) to follow and contribute to discussions about the [Open WIN Tools](tools.md), [events](events.md) or plans for the community.
 
-👋 [Comment on this GitHub repository](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/contact.html#comment-on-the-github-repository-), add an issue or submit a pull request to suggest changes to this documentation.
+👋 [Comment on this GitHub repository](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/contact.html#comment-on-the-github-repository-), add an issue or submit a pull request to suggest changes to this documentation.
 
-👋 [Email the Open WIN Community Coordinator](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/contact.html#email-the-open-win-community-coordinator-directly-) to introduce yourself, or ask a question about any aspect of this repository or the work of the Open WIN Community or Working Groups.
+👋 [Email the Open WIN Community Coordinator](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/contact.html#email-the-open-win-community-coordinator-directly-) to introduce yourself, or ask a question about any aspect of this repository or the work of the Open WIN Community or Working Groups.

docs/community/CODE_OF_CONDUCT.md

@@ -18,7 +18,7 @@ We value the participation of every member of our community and want to ensure t
 
 Accordingly, everyone who participates in the Open WIN Community is expected to show respect and courtesy to other community members at all times.
 
-Cassandra Gould van Praag, as [Community Engagement Coordinator](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/community/community-who.html#community-coordinator---cassandra-gould-van-praag-sheher) of this project, and all project members, are dedicated to a ***harassment-free experience for everyone***, regardless of gender, gender identity and expression, sexual orientation, disability, physical appearance, body size, race, age, religion or technology choices. **We do not tolerate harassment by and/or of members of our community in any form**.
+Cassandra Gould van Praag, as [Community Engagement Coordinator](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/community/community-who.html#community-coordinator---cassandra-gould-van-praag-sheher) of this project, and all project members, are dedicated to a ***harassment-free experience for everyone***, regardless of gender, gender identity and expression, sexual orientation, disability, physical appearance, body size, race, age, religion or technology choices. **We do not tolerate harassment by and/or of members of our community in any form**.
 
 ## Traditionally under-represented groups
 We are particularly motivated to support new and/or anxious contributors, people who are looking to learn and develop their skills, and anyone who has experienced discrimination in the past.

docs/community/accessaibility-statement.md

@@ -16,7 +16,7 @@ Accessibility Statement for the Wellcome Centre for Integrative Neuroimaging’s
 The Wellcome Centre for Integrative Neuroimaging (WIN) is committed to providing an accessible web presence that gives members of the public and members of the WIN community full access to centre information, courses and activities offered publicly through the web. Our [Equality Policy](https://www.win.ox.ac.uk/about/edi) outlines our commitment to a culture which maintains a working, learning and social environment in which the rights and dignity of all its staff and students are respected.
 
 This accessibility statement applies to University of Oxford, Wellcome Centre for Integrative Neuroimaging’s Open Science Websites listed below:
-1.	[https://cassgvp.github.io/WIN-Open-Neuroimaging-Community](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community)
+1.	[https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community)
 2.	[https://git.fmrib.ox.ac.uk](https://git.fmrib.ox.ac.uk)
 3.	[https://open.win.ox.ac.uk/protocols](https://open.win.ox.ac.uk/protocols)
 
@@ -160,7 +160,7 @@ We want to provide the best possible experience for all our website visitors. To
 ## Preparation of this accessibility statement
 This statement was prepared on 22nd October 2020. It will be reviewed again in February 2021.
 
-This website was last tested in October 2020. The test was carried out by the Wellcome Centre for Integrative Neuroimaging’s Administration Team using all pages. The CMS has been audited for accessibility by the suppliers (GitHub) and the Wellcome Centre for Integrative Neuroimaging Administration Team. A full copy of the audit results is available by request from the [Open Science Community Coordinator](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/community/community-who.html#community-coordinator---cassandra-gould-van-praag-sheher)
+This website was last tested in October 2020. The test was carried out by the Wellcome Centre for Integrative Neuroimaging’s Administration Team using all pages. The CMS has been audited for accessibility by the suppliers (GitHub) and the Wellcome Centre for Integrative Neuroimaging Administration Team. A full copy of the audit results is available by request from the [Open Science Community Coordinator](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/community/community-who.html#community-coordinator---cassandra-gould-van-praag-sheher)
 
 The pages were checked manually using a combination of the following methods:
 

docs/community/pathways-1-barriers-and-solutions-inclusivity.md

@@ -24,7 +24,7 @@ We are working closely with the [WIN Member Networks](https://www.win.ox.ac.uk/a
 We could consider devising a protocol for welcoming new members into the community and making that explicit to those who are able to engage more. For example, noticing when someone joins the slack group and giving them a wave or invite them to introduce themselves 👋
 
 ### Accessible point contact
-We could consider offering new community members the opportunity for a one-to-one meeting with the [Community Coordinator](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/community/community-who.html#community-coordinator---cassandra-gould-van-praag-sheher), so they feel comfortable in making a direct approach where necessary and that they "know" at least one person before attending events or contributing.
+We could consider offering new community members the opportunity for a one-to-one meeting with the [Community Coordinator](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/community/community-who.html#community-coordinator---cassandra-gould-van-praag-sheher), so they feel comfortable in making a direct approach where necessary and that they "know" at least one person before attending events or contributing.
 
 ### Open communication
 We should develop universally accessible ways to communicate and explain the results of in-person activities. This is essential for anyone missing from a conversation and neurodiverse individuals.

docs/community/roadmap.md

@@ -42,7 +42,7 @@ These documents have been devised as part of the [Mozilla Open Leadership Framew
 Complete 🥳
 
 #### Tasks completed
-- [x] [Project vision](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/open-leadership.html#vision-statement)
+- [x] [Project vision](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/open-leadership.html#vision-statement)
 - [x] [Lean canvas: One page business plan describing how you will execute your vision](open-leadership.md)
 - [x] [Project landing page or README](../../index.md)
 - [x] [Roadmap for identifying milestones in the project](roadmap.md)
@@ -104,7 +104,7 @@ Complete
 - [x] Action feedback from external presentation
 - [x] Prepare talk (30 minutes)
 - [x] [Define and document routes for interested WIN members to engage](../../contact.md)
-- [x] [Set up and communicate slack](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/contact.html#open-win-slack-)
+- [x] [Set up and communicate slack](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/contact.html#open-win-slack-)
 - [x] Advertise date for hack-day
 
 #### Due date

docs/community/strategy.md

@@ -18,7 +18,7 @@ Developing the strategy for emgagement.
 Work in Progress
 {: .label .label-yellow }
 
-By [Cass Gould van Praag](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/community/community-who.html#community-coordinator---cassandra-gould-van-praag-sheher). Wo
+By [Cass Gould van Praag](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/community/community-who.html#community-coordinator---cassandra-gould-van-praag-sheher). Wo
 
 We need to haver a plan to structure our activities and measure their success! I am going to start this process following a strategy structure shared by the excellent people at [The Centre for Scientific Collaboration and Community Engagement (CSCCE)](https://www.cscce.org/2019/03/14/an-agile-community-strategy-or-how-to-use-okrs-to-say-no-and-stay-focused/). Community vision and mission statements will be created using materials shared via [Community Pulse](https://www.communitypulse.io/50-metrics-kpis-and-okrs/).
 

docs/contact.md

@@ -19,7 +19,7 @@ Anyone affiliated with a WIN member Department is invited to [join our Slack wor
 
 **Slack is where the conversation will be most active and we will share resources with each other. If you're new to the Community, this should be your first contact point!**
 
-The above [slack invite link](https://join.slack.com/t/openwin/signup) will accept email addresses from any of the University of Oxford domains listed below. If you think your domain should be listed here, or you are a WIN member without an email address at one of these domains, please email the [Open WIN Community Coordinator](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/contact.html#email-the-open-win-community-coordinator-directly-).
+The above [slack invite link](https://join.slack.com/t/openwin/signup) will accept email addresses from any of the University of Oxford domains listed below. If you think your domain should be listed here, or you are a WIN member without an email address at one of these domains, please email the [Open WIN Community Coordinator](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/contact.html#email-the-open-win-community-coordinator-directly-).
 
 ### WIN member domains (alphabetically)
 - [bdi.ox.ac.uk](https://www.bdi.ox.ac.uk)
@@ -34,7 +34,7 @@ The above [slack invite link](https://join.slack.com/t/openwin/signup) will acce
 
 ## Open WIN Mailing List ![mail-list](img/icon-maillist.png)
 
-Anyone interested in the Open WIN Community or these resources can join the [WIN Open Neuroimaging mailing list](https://mail.fmrib.ox.ac.uk/mailman/listinfo/win-open-imaging). *The list is open only to University of Oxford staff and students (requires an SSO login)*. This mailing list is used for open distribution of information. We will also email round-ups of the discussion happening on the [Slack](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/contact.html#open-win-slack-)
+Anyone interested in the Open WIN Community or these resources can join the [WIN Open Neuroimaging mailing list](https://mail.fmrib.ox.ac.uk/mailman/listinfo/win-open-imaging). *The list is open only to University of Oxford staff and students (requires an SSO login)*. This mailing list is used for open distribution of information. We will also email round-ups of the discussion happening on the [Slack](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/contact.html#open-win-slack-)
 
 ## Email the Open WIN Community Coordinator Directly ![mailto](img/icon-at.png)
 

docs/tools/acquisition.md

@@ -29,7 +29,7 @@ Coming soon
 
 <br>
 
-[![For WIN members](../img/btn-win.png)](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/tools/acquisition.html#for-win-members)      [![For external researchers](../img/btn-external.png)](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/tools/acquisition.html#for-external-researchers)
+[![For WIN members](../img/btn-win.png)](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/tools/acquisition.html#for-win-members)      [![For external researchers](../img/btn-external.png)](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/tools/acquisition.html#for-external-researchers)
 
 ## For WIN members
 #### Version control ![version-control](../img/icon-version-control.png)

docs/tools/analysis.md

@@ -34,7 +34,7 @@ Coming soon
 
 <br>
 
-[![For WIN members](../img/btn-win.png)](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/tools/analysis.html#for-win-members)      [![For external researchers](../img/btn-external.png)](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/tools/analysis.html#for-external-researchers)
+[![For WIN members](../img/btn-win.png)](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/tools/analysis.html#for-win-members)      [![For external researchers](../img/btn-external.png)](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/tools/analysis.html#for-external-researchers)
 
 ## For WIN members
 #### Version control ![version-control](../img/icon-version-control.png)

docs/tools/data.md

@@ -35,7 +35,7 @@ The Data Usage Agreement and de-identification process is being developed with t
 #### Quality control
 WIN members will also be encouraged to run and share the results of predefined quality control algorithms, so anyone accessing the data can have a ready measure of image quality.
 
-[![For WIN members](../img/btn-win.png)](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/tools/data.html#for-win-members)      [![For external researchers](../img/btn-external.png)](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/tools/data.html#for-external-researchers)
+[![For WIN members](../img/btn-win.png)](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/tools/data.html#for-win-members)      [![For external researchers](../img/btn-external.png)](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/tools/data.html#for-external-researchers)
 
 Coming soon
 {: .label .label-yellow }

docs/tools/tasks.md

@@ -21,7 +21,7 @@ The Open Tasks working group aims to encourage and incentivise researchers desig
 
 <br>
 
-[![For WIN members](../img/btn-win.png)](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/tools/tasks.html#for-win-members)      [![For external researchers](../img/btn-external.png)](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/tools/tasks.html#for-external-researchers)
+[![For WIN members](../img/btn-win.png)](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/tools/tasks.html#for-win-members)      [![For external researchers](../img/btn-external.png)](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/tools/tasks.html#for-external-researchers)
 
 ## For WIN members
 #### Version control ![version-control](../img/icon-version-control.png)

index.md

@@ -24,7 +24,7 @@ The material shared here is written and maintained by an active community of WIN
 
 **Jump straight into one of the sections below, or use the sidebar to find out more about this repository.**
 
-[![tools](docs/img/btn-tools.png)](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/tools.html)  [![community](docs/img/btn-community.png)](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/community.html)  [![ambassadors](docs/img/btn-ambass.png)](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/ambassadors.html)  [![events](docs/img/btn-events.png)](https://cassgvp.github.io/WIN-Open-Neuroimaging-Community/docs/events.html)
+[![tools](docs/img/btn-tools.png)](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/tools.html)  [![community](docs/img/btn-community.png)](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/community.html)  [![ambassadors](docs/img/btn-ambass.png)](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/ambassadors.html)  [![events](docs/img/btn-events.png)](https://open.win.ox.ac.uk/pages/open-science/Open-WIN-Community/docs/events.html)