fslpy

The fslpy project is a FSL programming library written in Python. It is used by FSLeyes.

Dependencies

All of the dependencies of fslpy are listed in the requirements.txt file. Some fslpy modules require wxPython 3.0.2.0 or higher.

Documentation

fslpy is documented using sphinx. You can build the API documentation by running:

python setup.py doc

The HTML documentation will be generated and saved in the doc/html/ directory.

If you are interested in contributing to fslpy, check out the contributing guide.

Tests

Run the test suite via:

python setup.py test

A test report will be generated at report.html, and a code coverage report will be generated in htmlcov/.

Credits

The fsl.data.dicom module is little more than a thin wrapper around Chris Rorden's dcm2niix program.