Skip to content
Snippets Groups Projects
Commit c04931e4 authored by Paul McCarthy's avatar Paul McCarthy :mountain_bicyclist:
Browse files

RF: Use new resample module

parent d9f52108
No related branches found
No related tags found
No related merge requests found
...@@ -53,6 +53,7 @@ import numpy as np ...@@ -53,6 +53,7 @@ import numpy as np
import fsl.data.image as fslimage import fsl.data.image as fslimage
import fsl.data.constants as constants import fsl.data.constants as constants
from fsl.utils.platform import platform as platform from fsl.utils.platform import platform as platform
import fsl.utils.image.resample as resample
import fsl.utils.transform as transform import fsl.utils.transform as transform
import fsl.utils.notifier as notifier import fsl.utils.notifier as notifier
import fsl.utils.settings as fslsettings import fsl.utils.settings as fslsettings
...@@ -695,9 +696,8 @@ class Atlas(fslimage.Image): ...@@ -695,9 +696,8 @@ class Atlas(fslimage.Image):
# for resampling, as it is most likely # for resampling, as it is most likely
# that the mask is binary. # that the mask is binary.
try: try:
mask, xform = mask.resample(self.shape[:3], mask, xform = resample.resample(
dtype=np.float32, mask, self.shape[:3], dtype=np.float32, order=0)
order=0)
except ValueError: except ValueError:
raise MaskError('Mask has wrong number of dimensions') raise MaskError('Mask has wrong number of dimensions')
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment