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Evan Edmond
fslpy
Commits
d0e362f8
Commit
d0e362f8
authored
7 years ago
by
Paul McCarthy
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Remove uses of deprecated voxelsToScaledVoxels method
parent
2d8f781b
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fsl/utils/transform.py
+9
-9
9 additions, 9 deletions
fsl/utils/transform.py
with
9 additions
and
9 deletions
fsl/utils/transform.py
+
9
−
9
View file @
d0e362f8
...
@@ -555,10 +555,10 @@ def flirtMatrixToSform(flirtMat, srcImage, refImage):
...
@@ -555,10 +555,10 @@ def flirtMatrixToSform(flirtMat, srcImage, refImage):
:arg refImage: Reference :class:`.Image`
:arg refImage: Reference :class:`.Image`
"""
"""
srcScaledVoxelMat
=
srcImage
.
voxelsToScaledVoxels
()
srcScaledVoxelMat
=
srcImage
.
voxToScaledVoxMat
refScaledVoxelMat
=
refImage
.
voxelsToScaledVoxels
()
refInvScaledVoxelMat
=
refImage
.
voxToScaledVoxMat
refInvScaledVoxelMat
=
refImage
.
scaledVoxToVoxMat
refVoxToWorldMat
=
refImage
.
voxToWorldMat
refVoxToWorldMat
=
refImage
.
voxToWorldMat
refInvScaledVoxelMat
=
invert
(
refScaledVoxelMat
)
return
concat
(
refVoxToWorldMat
,
return
concat
(
refVoxToWorldMat
,
refInvScaledVoxelMat
,
refInvScaledVoxelMat
,
...
@@ -581,15 +581,15 @@ def sformToFlirtMatrix(srcImage, refImage, srcXform=None):
...
@@ -581,15 +581,15 @@ def sformToFlirtMatrix(srcImage, refImage, srcXform=None):
:attr:`.Nifti.voxToWorldMat`
:attr:`.Nifti.voxToWorldMat`
"""
"""
srcScaledVox
els
ToVox
els
Mat
=
invert
(
srcImage
.
voxelsToScaledVoxels
())
srcScaledVoxToVoxMat
=
srcImage
.
scaledVoxToVoxMat
srcVoxToWorldMat
=
srcImage
.
voxToWorldMat
srcVoxToWorldMat
=
srcImage
.
voxToWorldMat
refWorldToVoxMat
=
invert
(
refImage
.
voxToWorld
Mat
)
refWorldToVoxMat
=
refImage
.
worldToVox
Mat
refVox
els
ToScaledVox
els
Mat
=
refImage
.
vox
els
ToScaledVox
els
()
refVoxToScaledVoxMat
=
refImage
.
voxToScaledVox
Mat
if
srcXform
is
not
None
:
if
srcXform
is
not
None
:
srcVoxToWorldMat
=
srcXform
srcVoxToWorldMat
=
srcXform
return
concat
(
refVox
els
ToScaledVox
els
Mat
,
return
concat
(
refVoxToScaledVoxMat
,
refWorldToVoxMat
,
refWorldToVoxMat
,
srcVoxToWorldMat
,
srcVoxToWorldMat
,
srcScaledVox
els
ToVox
els
Mat
)
srcScaledVoxToVoxMat
)
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