Commits · 99f3632a86e8d27bfba4bfa9d0c4837e5acc2b94 · Evan Edmond / fslpy

Jul 30, 2019
- Merge branch 'rf/vest' into 'master' · 99f3632a
  Paul McCarthy authored 5 years ago
  
  Rf/vest See merge request fsl/fslpy!146
  99f3632a
- DOC: Changelog · 2cf9719c
  Paul McCarthy authored 5 years ago
  
  2cf9719c
- TEST: Extra vest tests · aa858ad8
  Paul McCarthy authored 5 years ago
  
  aa858ad8
- RF: Make vest loader a bit more lenient · 9f204083
  Paul McCarthy authored 5 years ago
  
  9f204083
- Merge branch 'enh/transforms' into 'master' · 2aa93074
  Paul McCarthy authored 5 years ago
  
  enh/transforms See merge request fsl/fslpy!113
  2aa93074
Jul 24, 2019
- Merge branch 'mnt/post-release' into 'master' · 0d60759d
  Paul McCarthy authored 5 years ago
  
  MNT: post-release version bump See merge request fsl/fslpy!145
  0d60759d
- MNT: post-release version bump · 5173d7ef
  Paul McCarthy authored 5 years ago
  
  5173d7ef
- Merge branch 'rel/v2.4' into 'master' · d9e7335b
  Paul McCarthy authored 5 years ago
  
  Rel/v2.4 See merge request fsl/fslpy!144
  View commits for tag 2.4.0 2.4.0
  
  d9e7335b
- MNT: Version · 8f6b3da2
  Paul McCarthy authored 5 years ago
  
  8f6b3da2
- DOC: Changelog · 09209959
  Paul McCarthy authored 5 years ago
  
  09209959
- TEST: Mistake in test · bbc60c76
  Paul McCarthy authored 5 years ago
  
  bbc60c76
- TEST: More basic tests for x5 scripts · 2fa377ae
  Paul McCarthy authored 5 years ago
  
  2fa377ae
- RF: Tweaks to x5 scripts · 1587e85a
  Paul McCarthy authored 5 years ago
  
  1587e85a
- RF: Let argparse decide whether args are invalid · a53e041f
  Paul McCarthy authored 5 years ago
  
  a53e041f
- DOC: Changelog, readme · eafd08c2
  Paul McCarthy authored 5 years ago
  
  eafd08c2
- RF: Use same interp setting when resampling deformation field to · 46b9e4f8
  Paul McCarthy authored 5 years ago
  
  alternate reference
  46b9e4f8
- TEST: Tests using alternate source image · fedc11cc
  Paul McCarthy authored 5 years ago
  
  fedc11cc
Jul 23, 2019
- RF: applyDeformation supports input image with different FOV to original · 588f2bf8
  Paul McCarthy authored 5 years ago
  
  source image
  588f2bf8
- RF: Adjust roi module to use new import · b41c630c
  Paul McCarthy authored 5 years ago
  
  b41c630c
- RF: Print help on no-args · 3aef4975
  Paul McCarthy authored 5 years ago
  
  3aef4975
- RF: Warning message for convert/apply_x5 · 74812ead
  Paul McCarthy authored 5 years ago
  
  74812ead
- TEST: Test non-voxel-alignedd field+ref combo; adjust altref test · 3374f5a4
  Paul McCarthy authored 5 years ago
  
  3374f5a4
- BF: Call existent parseVersionString function, as opposed to non-existent · a4f06be4
  Paul McCarthy authored 5 years ago
  
  variant. applyDeformation/convertDeformationType/Space were assuming voxel alignment between deformation field and reference image.
  a4f06be4
- RF: Reference image no longer needs to be in the same space as a deformation · 54ce09bd
  Paul McCarthy authored 5 years ago
  
  field
  54ce09bd
- RF: More sensible initial X5 version · b51fe1f5
  Paul McCarthy authored 5 years ago
  
  b51fe1f5
- MNT: Include source code in docbuild · 1d5d74cb
  Paul McCarthy authored 5 years ago
  
  1d5d74cb
- DOC: Fixes and tweaks · 6d912c17
  Paul McCarthy authored 5 years ago
  
  6d912c17
- MNT: Fix bug in docbuild · c0156439
  Paul McCarthy authored 5 years ago
  
  c0156439
- DOC: Formatting, tweaks · 3703fb5a
  Paul McCarthy authored 5 years ago
  
  3703fb5a
- MNT: Fix docbuild · 2900d79e
  Paul McCarthy authored 5 years ago
  
  2900d79e
- MNT: Bug in entrypoint spec · ac04696a
  Paul McCarthy authored 5 years ago
  
  ac04696a
- TEST: Unit tests for apply_x5 · 6f1d7c2a
  Paul McCarthy authored 5 years ago
  
  6f1d7c2a
- BF: Fix to argument specs · 15603d98
  Paul McCarthy authored 5 years ago
  
  15603d98
- TEST: Tests for new resample/nonlinear things. Empty apply_x5 test module · 7fee93d6
  Paul McCarthy authored 5 years ago
  
  7fee93d6
- BF: Can't short-cut convertDeformationType, as it causes inf recursion between · 15ddfed9
  Paul McCarthy authored 5 years ago
  
  DefField.deformationType and detectDeformationType. Also fix applyDeformation where not using altref
  15ddfed9
- MNT: fsl_apply_x5 entry point · 5d1153f5
  Paul McCarthy authored 5 years ago
  
  5d1153f5
- ENH: New fsl_apply_x5 script, to apply a X5 transformation to an image · 309da951
  Paul McCarthy authored 5 years ago
  
  309da951
- ENH: New function to apply a deformation field. Easier than anticipated. · 7adfdb19
  Paul McCarthy authored 5 years ago
  
  7adfdb19
- ENH: parse_data.Image allows additional Image.__init__ arguments to be · 65a51503
  Paul McCarthy authored 5 years ago
  
  passed. Used by fsl_convert_x5
  65a51503
- ENH: resampleToReference now accepts a custom matrix, allowing us to apply a · 07fc4c17
  Paul McCarthy authored 5 years ago
  
  transformation (e.g. FLIRT registration) during the resampling. Missed imports in deprecated fsl.utils.transform
  07fc4c17