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Evan Edmond
fslpy
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e056ac752fc14289a864d07afa738d9d61adecd8
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Aug
Two new things in fsl.utils:
Async TaskThread absorbs errors (typically raised on shutdown).
1. The async.wait function can either be run directly, or can be run on
Fixed if ImageWrapper.__init__ crashes, ImageWrapper.__del__ complains
Doc typos.
If Image(loadData=True), threaded/indexed arguments are ignored.
Image uses a SafeIndexedGzipFile for indexed images. ImageWrapper can
New thing in async module - the TaskThread, a simple task queue.
Source code no longer included in docs
ImageWrapper.__expandCoverage uses the new collapseExpansions function
Test case for collapseExpansions
New imagewrapper function, collapseExpansions, which combines/collapses
Fix to Nifti1 handling of images with unknown qform/sform codes.
Fixed CheckBoxMessageDialog default button selection
CheckBoxMessageDialog can have up to three buttons.
Bugfix in fsl.utils.platform, importing itself instead of built-in
Image.axisMapping is memoized (and corresponding bug-fix to memoizeMD5).
Async.idle now allows a delay to be specified, after which the task will
Image.save method implemented, and working with/without IndexedGzipFile.
Image.save method stub.
README update
Little bugfixes to Notifier and Image classes.
Adjusted image wrapper test to generate slices which are outside
Bugfix in ImageWrapper.__expandCoverage - variable name clashes.
Fix to ImageWRapper.__expandCoverage - np.isclose was beingcalled incorrectly
Last test case for ImageWrapper.
No, the ImageWrapper.coverage method does not return uint32 - uncovered
New test case for overlapping writes. One more test case to go.
Image wrapper Update data range on write was not clearing volume ranges.
What a nightmare. Partially testing ImageWrapper write support. best_*
ImageWrapper.coverage method returns uint32.
Untested support for writing image data. Other re-organisations and
New ImageWrapper test case, reduced number of iterations in other
ImageWrapper has a reset method which does initialisation stuff.
ImageWrapper now stores per-volume data ranges. Will make write support easier.
Logic for updating coverage previously in updateDataRangeOnRead moved
ImageWrapper test updates.
New function sliceOverlap which does a similar job to sliceCovered but
calcExpansion test coverage reduced a bit so it doesn't take an insane
ImageWrapper allows an initial data range to be passed in. ImageWrapper
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