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Commit 4baa3559 authored by Saad Jbabdi's avatar Saad Jbabdi
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added masdyads to postproc

parent e818e482
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......@@ -19,6 +19,10 @@ do
${FSLDIR}/bin/fslmaths ${subjdir}.bedpostX/merged_f${fib}samples -Tmean ${subjdir}.bedpostX/mean_f${fib}samples
${FSLDIR}/bin/make_dyadic_vectors ${subjdir}.bedpostX/merged_th${fib}samples ${subjdir}.bedpostX/merged_ph${fib}samples ${subjdir}.bedpostX/nodif_brain_mask ${subjdir}.bedpostX/dyads${fib}
if [ $fib -ge 2 ];then
${FSLDIR}/bin/maskdyads ${subjdir}.bedpostX/dyads${fib} ${subjdir}.bedpostX/mean_f${fib}samples
fi
fib=$(($fib + 1))
done
......
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