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Commit 6d5759ff authored by Saad Jbabdi's avatar Saad Jbabdi
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......@@ -26,12 +26,13 @@ MDV=make_dyadic_vectors
FMO=fdt_matrix_ops
INDEXER=indexer
TEST=testfile
ORDVEC=reorder_dyadic_vectors
DTIFITOBJS=dtifit.o dtifitOptions.o
CCOPSOBJS=ccops.o ccopsOptions.o
PTOBJS=probtrack.o probtrackOptions.o pt_alltracts.o pt_matrix.o pt_seeds_to_targets.o pt_simple.o pt_twomasks.o pt_matrix_mesh.o
PTXOBJS=probtrackx.o probtrackxOptions.o streamlines.o ptx_simple.o ptx_seedmask.o ptx_twomasks.o
PTXOBJS=probtrackx.o probtrackxOptions.o streamlines.o ptx_simple.o ptx_seedmask.o ptx_twomasks.o ptx_nmasks.o
FTBOBJS=find_the_biggest.o
PJOBJS=proj_thresh.o
MEDOBJS=medianfilter.o
......@@ -44,11 +45,12 @@ MDVOBJS=make_dyadic_vectors.o
FMOOBJS=fdt_matrix_ops.o
INDEXEROBJS=indexer.o
TESTOBJS=testfile.o
ORDVECOBJS=reorder_dyadic_vectors.o heap.o
SGEBEDPOST =sge_bedpost sge_bedpost_postproc.sh sge_bedpost_preproc.sh sge_bedpost_single_slice.sh
SGEBEDPOSTX=sge_bedpostX sge_bedpostX_postproc.sh sge_bedpostX_preproc.sh sge_bedpostX_single_slice.sh
SCRIPTS = eddy_correct bedpost bedpost_proc bedpost_cleanup bedpost_kill_all bedpost_kill_pid zeropad bedpost_datacheck
SCRIPTS = eddy_correct bedpost bedpost_proc bedpost_cleanup bedpost_kill_all bedpost_kill_pid zeropad bedpost_datacheck bedpostX bedpostX_proc
FSCRIPTS=correct_and_average ocmr_preproc bedpostX bedpostX_proc bedpostX_cleanup bedpostX_kill_all \
${SGEBEDPOST} ${SGEBEDPOSTX}
......@@ -109,6 +111,10 @@ ${TEST}: ${TESTOBJS}
${CXX} ${CXXFLAGS} ${LDFLAGS} -o $@ ${TESTOBJS} ${DLIBS}
${ORDVEC}: ${ORDVECOBJS}
${CXX} ${CXXFLAGS} ${LDFLAGS} -o $@ ${ORDVECOBJS} ${DLIBS}
......
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