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FSL
pyfeeds-tests
Commits
cf25fd67
Commit
cf25fd67
authored
1 year ago
by
Matthew Webster
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BF: /opt/fmrib/fsl may not contain activate
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42b24066
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BF: /opt/fmrib/fsl may not contain activate
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#21884
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Stage: fsl-ci-build
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unit_tests/utils/feedsRun.fslStartup
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unit_tests/utils/feedsRun.fslStartup
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unit_tests/utils/feedsRun.fslStartup
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cf25fd67
#!/usr/bin/env fslpython
#Note this script requires a conda activate script to be on the PATH
import os
import shlex
import tempfile
...
...
@@ -32,7 +34,7 @@ def run(cmd, ompthreads=None, blasthreads=None, fslskipglobal=None):
def main():
buildcmds = ['source
$FSLDIR/bin/
activate $FSLDIR',
buildcmds = ['source activate $FSLDIR',
'source $FSLDIR/etc/fslconf/fsl-devel.sh',
'make']
sp.run('; '.join(buildcmds), check=True, shell=True)
...
...
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