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Commit ebd80fbf authored by Paul McCarthy's avatar Paul McCarthy :mountain_bicyclist:
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Merge branch 'paulmc-master-patch-41502' into 'master'

Fix pnm/feedsRun

See merge request !2
parents 4044a10c d0613d89
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#!/bin/bash -e
iDir=$1
oDir=$2
oDir=$1
iDir=$2/fsl_course_data/fmri3/motion/
pnm_evs -i ${iDir}/naughty.nii.gz -c ${iDir}/pnm/prebaked/naughty_card.txt -r ${iDir}/pnm/prebaked/naughty_resp.txt -o ${oDir}/naughty --tr=0.933 --oc=4 --or=4 --multc=2 --multr=2 --rvt=${iDir}/pnm/prebaked/naughty_rvt.txt --rvtsmooth=10 --slicetiming=${iDir}/pnm/slice_timings.txt
pnm_evs -i ${iDir}/nice.nii.gz -c ${iDir}/pnm/prebaked/nice_card.txt -r ${iDir}/pnm/prebaked/nice_resp.txt -o ${oDir}/nice --tr=0.933 --oc=4 --or=4 --multc=2 --multr=2 --rvt=${iDir}/pnm/prebaked/nice_rvt.txt --rvtsmooth=10 --slicetiming=${iDir}/pnm/slice_timings.txt
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