mc/prefiltered_func_data_mcf_conf_hp.nii.gz
already exists in the input data directory, use it as the motion confounds, instead of loading and high-pass filtering the MCFLIRT results from mc/prefiltered_func_data_mcf.par
. This is required to support HCP scripts which perform their own filtering of motion confounds, and save them to mc/prefiltered_...._hp.nii.gz
.
Reported on the FSL mailing list: https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?A2=FSL;199b80ab.2409
fix4melview
label file. The original FIX was adjusted in 1.069 to do this, but this feature was never ported to pyfix. This was probably because the version of FIX on the FMRIB cluster was never updated beyond version 1.067.