Commits · 015c0dce7f93d45af004bfab0b3e325eb4ec79ce · Michiel Cottaar / fslpy · GitLab

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Jan 29, 2021
- RF: SeriesDescription may not be present in dmc2niix json output · 015c0dce
  Paul McCarthy authored 4 years ago
  
  015c0dce
Jan 21, 2021
- RF: minor formatting · d316b293
  Paul McCarthy authored 4 years ago
  
  d316b293
- ENH: add function to load settings from arbitrary fsf · 673a206d
  Evan Edmond authored 4 years ago
  
  673a206d
Jul 21, 2020
- ENH: New replacement Text2Vest2Text scripts · 767a4780
  Paul McCarthy authored 4 years ago
  
  767a4780
Jul 20, 2020
- ENH: Workings on some new vest functions to be used by Text2Vest/Vest2Text · e48b6ac2
  Paul McCarthy authored 4 years ago
  
  e48b6ac2
- RF: fixExt can pass arguments through to addExt · 54507efa
  Paul McCarthy authored 4 years ago
  
  54507efa
Jun 23, 2020
- DOC: fixes · 114bf373
  Paul McCarthy authored 4 years ago
  
  114bf373
May 18, 2020
- RF: Better support for nifti1/2 + FSLOUTPUTTYPE · f2ce0ed9
  Paul McCarthy authored 4 years ago
  
  f2ce0ed9
- ENH: New Nifti.niftiDataType property · a33a8492
  Paul McCarthy authored 4 years ago
  
  a33a8492
May 01, 2020
- BUG: add tests for extracting images/surface data · 4cd6c30b
  Michiel Cottaar authored 4 years ago
  
  4cd6c30b
- BUG: test IO for CIFTI · bca18bf7
  Michiel Cottaar authored 4 years ago
  
  bca18bf7
- TEST: added tests for reading NIFTI and GIFTI · 6910c699
  Michiel Cottaar authored 4 years ago
  
  also added more support for loading basenames without extensions
  6910c699
- BUG: set undefined axes to None · db21c20b
  Michiel Cottaar authored 4 years ago
  
  db21c20b
- ENH: Initial proposal for CIFTI support · c95dacf1
  Michiel Cottaar authored 4 years ago
  
  c95dacf1
Apr 14, 2020
- RF: isMelodicDir no longer requires dir to end in .ica, and no longer accepts · 0e98316b
  Paul McCarthy authored 4 years ago
  
  a file or sub-dir
  0e98316b
- MNT: more detailed error message · 34084a75
  Paul McCarthy authored 4 years ago
  
  34084a75
Mar 29, 2020
- BF: Image creation does not fail if a sidecar file with invalid JSON is · e7341f65
  Paul McCarthy authored 5 years ago
  
  present
  e7341f65
Mar 28, 2020
- MNT: Aah. Remove all the deprecated things. · 630b9e1a
  Paul McCarthy authored 5 years ago
  
  630b9e1a
Mar 27, 2020
- RF: Allow passing log=None · 2fce4822
  Paul McCarthy authored 5 years ago
  
  2fce4822
Mar 18, 2020
- RF,ENH: Rewrite gifti.relatedFiles to support BIDS-style naming conventions · 8bbff876
  Paul McCarthy authored 5 years ago
  
  8bbff876
Mar 16, 2020
- RF: Allow .gii surfaces, but don't try to auto-load them · 581400f2
  Paul McCarthy authored 5 years ago
  
  581400f2
Feb 28, 2020
- BF: Image can no longer clear headerref · c47b9269
  Paul McCarthy authored 5 years ago
  
  c47b9269
- RF,BF: Nifti.header is now protected via property setter - Failure in · 6abd4abf
  Paul McCarthy authored 5 years ago
  
  Image.save was resulting in a Nifti without a header.
  6abd4abf
Feb 04, 2020
- BF: only load bids metadata if image is in bids dir, *and* has a bids filename. · f5f631e2
  Paul McCarthy authored 5 years ago
  
  f5f631e2
Jan 28, 2020
- BF: MGH imagesmay have zooms which don't match their vox2ras affine - make · a127f656
  Paul McCarthy authored 5 years ago
  
  sure the MGHImage class preserves this.
  a127f656
- ENH: New voxToSurfMat, for generating a freesurfer affine for any image. · 25865a2a
  Paul McCarthy authored 5 years ago
  
  25865a2a
Jan 27, 2020
- DOC: note on save method · cfe52385
  Paul McCarthy authored 5 years ago
  
  cfe52385
Jan 25, 2020
- BF: Force mesh indices to be integers. Remove unnecessary Mesh.__new__. · ebd14e27
  Paul McCarthy authored 5 years ago
  
  ebd14e27
Dec 12, 2019
- DOC: clarification · da579bd8
  Paul McCarthy authored 5 years ago
  
  da579bd8
- RF: Adjust Image.save workflow to ensure image data is synced · a040a24f
  Paul McCarthy authored 5 years ago
  
  a040a24f
- RF: Don't use get_data · d8231fe2
  Paul McCarthy authored 5 years ago
  
  d8231fe2
- RF: Don't use nibabel get_data method · a95870fe
  Paul McCarthy authored 5 years ago
  
  a95870fe
- RF: ImageWrapper maintains its own internal data cache, rather than relying on · 6f9ecfa5
  Paul McCarthy authored 5 years ago
  
  nibabel
  6f9ecfa5
- MNT: Use %, rather than {} formatting in log calls · d30d7349
  Paul McCarthy authored 5 years ago
  
  d30d7349
Dec 02, 2019
- BF: Fix up adjust method · d92f8e0f
  Paul McCarthy authored 5 years ago
  
  d92f8e0f
Nov 29, 2019
- DOC: clarify · 81cb7c60
  Paul McCarthy authored 5 years ago
  
  81cb7c60
- DOC: update · e3bb0fcf
  Paul McCarthy authored 5 years ago
  
  e3bb0fcf
- ENH: New Nifti.adjust method for adjusting a header shape/pixdim · e4acefd6
  Paul McCarthy authored 5 years ago
  
  e4acefd6
- RF: Deprecated image.resample.calculateMatrrix, moved logic to new · 0c5bb53b
  Paul McCarthy authored 5 years ago
  
  affine.rescale function, for reuse.
  0c5bb53b
Nov 12, 2019
- RF: Allow triangles to be parallel to camera vector · 9c7df3ad
  Paul McCarthy authored 5 years ago
  
  9c7df3ad