Commits · 2a8929a3672bd10660f317d6445b06c46199d7ae · FSL / fslpy · GitLab

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Mar 18, 2020
- TEST: update wrapper tests ("output" -> "stdout"). New test for results · 2a8929a3
  Paul McCarthy authored 5 years ago
  
  attribute access. New test for fileOrText decorator
  2a8929a3
- RF/BF: Update fileOrText decorator to work with input files - they must be · aac90673
  Paul McCarthy authored 5 years ago
  
  specified as pathlib.Path objects, so they can be differentiated from input values.
  aac90673
- RF/ENH: Wrapper outputs are now accessible as attributes in addition to dict · e48be57c
  Paul McCarthy authored 5 years ago
  
  items (where possible). Result standard output renamed from "output" to "stdout".
  e48be57c
- DOC: changelog · 30ed9039
  Paul McCarthy authored 5 years ago
  
  30ed9039
- TEST test applyxfm4D wrapper · 7fa20554
  Paul McCarthy authored 5 years ago
  
  7fa20554
- ENH: new applyxfm4D wrapper · d2f522f6
  Paul McCarthy authored 5 years ago
  
  d2f522f6
- DOC: listen to sphinx warnings · b362fae5
  Paul McCarthy authored 5 years ago
  
  b362fae5
- TEST: Test case for fot submit behaviour · 6a743aa1
  Paul McCarthy authored 5 years ago
  
  6a743aa1
- RF: FileOrThing passes-through if submit=True, and errors if in-memory or LOAD · 4026cbba
  Paul McCarthy authored 5 years ago
  
  is used in conjunction with submit=True
  4026cbba
- DOC: changelog · 60bde1fd
  Paul McCarthy authored 5 years ago
  
  60bde1fd
- TEST: test prelude wrapper · e3fda1ec
  Paul McCarthy authored 5 years ago
  
  e3fda1ec
- ENH: new prelude wrapper · 60ca36b2
  Paul McCarthy authored 5 years ago
  
  60ca36b2
- TEST: fslsub tests · e985dd1f
  Paul McCarthy authored 5 years ago
  
  e985dd1f
- TEST: unit test for prepareArgs · 91315505
  Paul McCarthy authored 5 years ago
  
  91315505
- RF: prepareArgs should use shlex · d7c678c3
  Paul McCarthy authored 5 years ago
  
  d7c678c3
- DOC: copyright · 8c3371d2
  Paul McCarthy authored 5 years ago
  
  8c3371d2
- Merge branch 'rf/gifti' into 'master' · 432abc93
  Paul McCarthy authored 5 years ago
  
  Rf/gifti See merge request fsl/fslpy!206
  432abc93
- DOC: changelog · c92f18ed
  Paul McCarthy authored 5 years ago
  
  c92f18ed
- TEST: expand gifti.relatedFiles test · 43a31b1e
  Paul McCarthy authored 5 years ago
  
  43a31b1e
- RF,ENH: Rewrite gifti.relatedFiles to support BIDS-style naming conventions · 8bbff876
  Paul McCarthy authored 5 years ago
  
  8bbff876
- ENH: BIDSFile.match option to disable suffix match · 87844728
  Paul McCarthy authored 5 years ago
  
  87844728
- DOC: changelog · cbf70da9
  Paul McCarthy authored 5 years ago
  
  cbf70da9
- TEST: update bids tests · 1547872a
  Paul McCarthy authored 5 years ago
  
  1547872a
- RF: bids module updated to support files with any extension. · 23c46fa1
  Paul McCarthy authored 5 years ago
  
  23c46fa1
- DOC: changelog · 3b8bc0af
  Paul McCarthy authored 5 years ago
  
  3b8bc0af
- TEST: test firstDot option · 1a27de19
  Paul McCarthy authored 5 years ago
  
  1a27de19
- ENH: new "firstDot" option to addget/remove/splitExt, for general · a35946ea
  Paul McCarthy authored 5 years ago
  
  double-barrelled filename support (but not HCP files :( )
  a35946ea
Mar 16, 2020
- RF: Allow .gii surfaces, but don't try to auto-load them · 581400f2
  Paul McCarthy authored 5 years ago
  
  581400f2
Mar 02, 2020
- Merge branch 'bf/filetree' into 'master' · 6fefefb6
  Paul McCarthy authored 5 years ago
  
  Bf/filetree See merge request fsl/fslpy!203
  6fefefb6
- DOC: changelog · d0081286
  Paul McCarthy authored 5 years ago
  
  d0081286
- RF: remover dupe call to update · dd7b7afb
  Paul McCarthy authored 5 years ago
  
  dd7b7afb
Mar 01, 2020
- ENH: Added partial filling of variables into the templates · 2b6adc54
  Michiel Cottaar authored 5 years ago
  
  This is now the new default behaviour when loading a new file This change is not backwards compatible!
  2b6adc54
- TEST: Test query with multiple sub-trees. Passes against <=2.8.1, fails · 90b24051
  Paul McCarthy authored 5 years ago
  
  against >=2.8.2.
  90b24051
Feb 28, 2020
- Merge branch 'rf/protect_nifti_header' into 'master' · d5b35844
  Paul McCarthy authored 5 years ago
  
  Rf/protect nifti header See merge request fsl/fslpy!200
  d5b35844
- CI: Ok · 8217bd86
  Paul McCarthy authored 5 years ago
  
  8217bd86
- CI: don't know what's going on · 684a9b97
  Paul McCarthy authored 5 years ago
  
  684a9b97
- BF: Image can no longer clear headerref · c47b9269
  Paul McCarthy authored 5 years ago
  
  c47b9269
- DOC: changelog · a72acc33
  Paul McCarthy authored 5 years ago
  
  a72acc33
- RF,BF: Nifti.header is now protected via property setter - Failure in · 6abd4abf
  Paul McCarthy authored 5 years ago
  
  Image.save was resulting in a Nifti without a header.
  6abd4abf
Feb 27, 2020
- Merge branch 'mnt/release' into 'master' · 1b56bbc5
  Paul McCarthy authored 5 years ago
  
  DOC: changelog [skip ci] See merge request fsl/fslpy!198
  1b56bbc5