Commits · c47b9269807427c4ef510afbe8f63b2da256668e · Michiel Cottaar / fslpy

Feb 28, 2020
- BF: Image can no longer clear headerref · c47b9269
  Paul McCarthy authored 5 years ago
  
  c47b9269
- DOC: changelog · a72acc33
  Paul McCarthy authored 5 years ago
  
  a72acc33
- RF,BF: Nifti.header is now protected via property setter - Failure in · 6abd4abf
  Paul McCarthy authored 5 years ago
  
  Image.save was resulting in a Nifti without a header.
  6abd4abf
Feb 27, 2020
- Merge branch 'mnt/release' into 'master' · 1b56bbc5
  Paul McCarthy authored 5 years ago
  
  DOC: changelog [skip ci] See merge request fsl/fslpy!198
  1b56bbc5
- DOC: changelog [skip ci] · a1f34c1e
  Paul McCarthy authored 5 years ago
  
  a1f34c1e
- Merge branch 'ref_template_parsing' into 'master' · 5a79b756
  Paul McCarthy authored 5 years ago
  
  REF: rewrote the parsing of the templates See merge request fsl/fslpy!197
  5a79b756
Feb 26, 2020

BUG: actually test the stated bug · 39e1cf1f
Michiel Cottaar authored 5 years ago
```
I think these tests would have failed before refactoring
```
39e1cf1f

REF: rewrote the parsing of the templates · 22595d38

Michiel Cottaar authored 5 years ago

There were some subtle bugs in the use of get_all, which should now be fixed. They were caused by having multiple optional variables and the result not being deterministic if these were iterated in different orders.

22595d38

Feb 20, 2020
- Merge branch 'mnt/release' into 'master' · 098dcf05
  Paul McCarthy authored 5 years ago
  
  Mnt/release See merge request fsl/fslpy!195
  098dcf05
- DOC: Writing down the release process [skip ci] · 66e55025
  Paul McCarthy authored 5 years ago
  
  66e55025
- DOC: changelog · 02a60121
  Paul McCarthy authored 5 years ago
  
  02a60121
- Merge branch 'bf/bids' into 'master' · f5d6cae7
  Paul McCarthy authored 5 years ago
  
  Bf/bids See merge request fsl/fslpy!194
  f5d6cae7
Feb 04, 2020
- TEST: regression · a302be8f
  Paul McCarthy authored 5 years ago
  
  a302be8f
- DOC: changelog · 459a1d13
  Paul McCarthy authored 5 years ago
  
  459a1d13
- BF: only load bids metadata if image is in bids dir, *and* has a bids filename. · f5f631e2
  Paul McCarthy authored 5 years ago
  
  f5f631e2
Jan 29, 2020
- Merge branch 'rf/mghimage_torig' into 'master' · e26fd9a1
  Paul McCarthy authored 5 years ago
  
  Rf/mghimage torig See merge request fsl/fslpy!192
  e26fd9a1
- DOC: changelog · f2ff03ce
  Paul McCarthy authored 5 years ago
  
  f2ff03ce
- DOC: changelog · dedeae3d
  Paul McCarthy authored 5 years ago
  
  dedeae3d
- TEST: test voxToSurfMat · 288adc0a
  Paul McCarthy authored 5 years ago
  
  288adc0a
Jan 28, 2020
- BF: MGH imagesmay have zooms which don't match their vox2ras affine - make · a127f656
  Paul McCarthy authored 5 years ago
  
  sure the MGHImage class preserves this.
  a127f656
- ENH: New voxToSurfMat, for generating a freesurfer affine for any image. · 25865a2a
  Paul McCarthy authored 5 years ago
  
  25865a2a
Jan 27, 2020
- Merge branch 'test/platform' into 'master' · 328cd4ef
  Paul McCarthy authored 5 years ago
  
  TEST: wx.GetApp() called through platform.haveGui) is returning an See merge request fsl/fslpy!190
  328cd4ef
- TEST: wx.GetApp() called through platform.haveGui) is returning an · 221aa557
  Paul McCarthy authored 5 years ago
  
  old App object, and causing test to fail.
  221aa557
- Merge branch 'rf/image_save' into 'master' · 8c832aad
  Paul McCarthy authored 5 years ago
  
  Rf/image save See merge request fsl/fslpy!188
  8c832aad
- TEST: Image.save semantics have changed · 686cde3a
  Paul McCarthy authored 5 years ago
  
  686cde3a
- MNT: copyright · 52c27360
  Paul McCarthy authored 5 years ago
  
  52c27360
- DOC: note on save method · cfe52385
  Paul McCarthy authored 5 years ago
  
  cfe52385
- Merge branch 'mnt/rel-2.8.0' into 'master' · 1e7ac7d1
  Paul McCarthy authored 5 years ago
  
  Mnt/rel 2.8.0 See merge request fsl/fslpy!186
  1e7ac7d1
- DOC: changelog · 827e6b6d
  Paul McCarthy authored 5 years ago
  
  827e6b6d
- MNT: pre-release version bump · 6ad7de9f
  Paul McCarthy authored 5 years ago
  
  6ad7de9f
- Merge branch 'bf/mesh_indices' into 'master' · 1f3fa431
  Paul McCarthy authored 5 years ago
  
  Bf/mesh indices See merge request fsl/fslpy!185
  1f3fa431
- BF: wrong data object · 0ab31648
  Paul McCarthy authored 5 years ago
  
  0ab31648
- DOC: changelog · 8b36d12e
  Paul McCarthy authored 5 years ago
  
  8b36d12e
- BF: resample should resample if shapes are different · 5aa2612e
  Paul McCarthy authored 5 years ago
  
  5aa2612e
Jan 25, 2020
- DOC: Changelog · 3647f196
  Paul McCarthy authored 5 years ago
  
  3647f196
- MNT: Relax rtree versioning · 4ad076f4
  Paul McCarthy authored 5 years ago
  
  4ad076f4
- BF: Force mesh indices to be integers. Remove unnecessary Mesh.__new__. · ebd14e27
  Paul McCarthy authored 5 years ago
  
  ebd14e27
Dec 12, 2019
- Merge branch 'rf/nibabel-get_data' into 'master' · 90fcc75d
  Paul McCarthy authored 5 years ago
  
  Rf/nibabel get data See merge request fsl/fslpy!184
  90fcc75d
- TEST: use fixture so we can see seed value. Make test more lenient · 70216109
  Paul McCarthy authored 5 years ago
  
  70216109
- DOC: clarification · da579bd8
  Paul McCarthy authored 5 years ago
  
  da579bd8