Commits · 3fd32ad2ed35e1afb7073173f5a28ca5b04c0318 · FSL / fslpy · GitLab

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Jan 19, 2021
- DOC: Various small updates, aim to release tonight · 3fd32ad2
  Paul McCarthy authored 4 years ago
  
  3fd32ad2
- CI: Test against py39 · d9a253cb
  Paul McCarthy authored 4 years ago
  
  d9a253cb
- TEST: Work around dcm2niix weirdnesses - an older version appears to have gone · ea332776
  Paul McCarthy authored 4 years ago
  
  missing from github, even older versions produce different numbers of series from a dicom dir, and different numbers of images from a series, and the newest version produces carets instead of underscores.
  ea332776
- DOC: Changelog [skip ci] · 71e42204
  Paul McCarthy authored 4 years ago
  
  71e42204
- Modify Popen call under WSL to prevent opening of a console window · 10dd3f99
  Martin Craig authored 4 years ago
  
  Without this any FSL call under Windows opens potentially multiple transient console windows which is distracting and slows down performance
  10dd3f99
Dec 07, 2020
- Merge branch 'evan-patch-smooth' into 'master' · 57348825
  Paul McCarthy authored 4 years ago
  
  ENH: add fslmaths simple smoothing See merge request fsl/fslpy!271
  57348825
- ENH: add fslmaths simple smoothing · 75ed6335
  Evan Edmond authored 4 years ago and Paul McCarthy committed 4 years ago
  
  75ed6335
Nov 26, 2020
- Merge branch 'evan-doc-filetree' into 'master' · 990f1d94
  Paul McCarthy authored 4 years ago
  
  DOC: filetree docs [skip-ci] See merge request fsl/fslpy!267
  990f1d94
- Apply 1 suggestion(s) to 1 file(s) · e942729c
  Evan Edmond authored 4 years ago
  
  e942729c
- Update __init__.py · 5e7f6f37
  Evan Edmond authored 4 years ago
  
  5e7f6f37
- DOC: filetree docs [skip-ci] · 967cc62e
  Evan Edmond authored 4 years ago
  
  967cc62e
Nov 25, 2020
- Merge branch 'evan-patch-fmap' into 'master' · 9db1e57e
  Paul McCarthy authored 4 years ago
  
  ENH: wrapper and test for fsl_prepare_fieldmap See merge request fsl/fslpy!265
  9db1e57e
- Merge branch 'evan-patch-filetree-2' into 'master' · 3cf668d1
  Paul McCarthy authored 4 years ago
  
  ENH: add .tree file for fsl_anat See merge request fsl/fslpy!264
  3cf668d1
- ENH: generic fsl_anat file tree · 30b9086b
  Evan Edmond authored 4 years ago
  
  30b9086b
- ENH: <scanner> defaults to 'SIEMENS' · d57adba3
  Evan Edmond authored 4 years ago
  
  d57adba3
- ENH: wrapper and test for fsl_prepare_fieldmap · 3dcfedbf
  Evan Edmond authored 4 years ago
  
  3dcfedbf
- ENH: fsl_anat tree file · 1a1b0751
  Evan Edmond authored 4 years ago
  
  1a1b0751
- ENH: fsl_anat tree file · 72670754
  Evan Edmond authored 4 years ago
  
  72670754
Nov 11, 2020
- Merge branch 'patch-1' into 'master' · 8e6af3ea
  Paul McCarthy authored 4 years ago
  
  DOC: fixed typo (bed instead of bet) in __init__.py See merge request fsl/fslpy!262
  8e6af3ea
- DOC: fixed typo (bed instead of bet) in __init__.py · 0d131298
  Evan Edmond authored 4 years ago
  
  0d131298
Oct 20, 2020
- Merge branch 'enh/tbss_wrappers' into 'master' · 9d8fb91a
  Paul McCarthy authored 4 years ago
  
  Enh/tbss wrappers See merge request fsl/fslpy!260
  9d8fb91a
- DOC: new stub for tbss mod · 2e878669
  Paul McCarthy authored 4 years ago
  
  2e878669
- MNT: Pre-emptive version bump · 065c6b5a
  Paul McCarthy authored 4 years ago
  
  065c6b5a
- RF: Change re-entrancy logic of disabled ctx manager so that, if · bef65e56
  Paul McCarthy authored 4 years ago
  
  bef65e56
- DOC: author [skip ci] · 750e46d8
  Paul McCarthy authored 4 years ago
  
  750e46d8
- DOC: changelog · 7ebfe017
  Paul McCarthy authored 4 years ago
  
  7ebfe017
- TEST: test that assertions are disabled with cmdonly=True · e940d19a
  Paul McCarthy authored 4 years ago
  
  e940d19a
- RF: when cmdonly is used with a wrapper function, assertions are disabled · 3ebae6b1
  Paul McCarthy authored 4 years ago
  
  3ebae6b1
- TEST: Unit tests for tbss wrappers · c63dc780
  Paul McCarthy authored 4 years ago
  
  c63dc780
- RF: Make tbss available at fsl.wrappers package level, minor clean ups · d99bff5f
  Paul McCarthy authored 4 years ago
  
  d99bff5f
- ENH: Wrappers for tbss scripts · 27fb3a8b
  Evan Edmond authored 4 years ago and Paul McCarthy committed 4 years ago
  
  27fb3a8b
- Merge branch 'mnt/recover' into 'master' · ded1c5af
  Paul McCarthy authored 4 years ago
  
  Mnt/recover See merge request fsl/fslpy!258
  ded1c5af
Oct 13, 2020
- Merge branch 'rf/cmdonly' into 'master' · 774d7b59
  Paul McCarthy authored 4 years ago
  
  Rf/cmdonly See merge request fsl/fslpy!259
  774d7b59
- TEST: Missed assert; make sure fileorthing handles cmdonly, and cmdonly works · 8a9b2c75
  Paul McCarthy authored 4 years ago
  
  when combining fileorthing and cmdwrapper
  8a9b2c75
- DOC: changelog · df13ddbd
  Paul McCarthy authored 4 years ago
  
  df13ddbd
- RF: FileOrThing passes through if cmdonly=True · 114783ae
  Paul McCarthy authored 4 years ago
  
  114783ae
Oct 12, 2020
- Merge branch 'enh/wrapper_cmdonly' into 'master' · 111c77a0
  Paul McCarthy authored 4 years ago
  
  Enh/wrapper cmdonly See merge request fsl/fslpy!257
  111c77a0
- TEST: Test cmdonly handling · 4c777562
  Paul McCarthy authored 4 years ago
  
  4c777562
- RF: Implement cmdonly in run.run, rather than in wrappers, so e.g. $FSLDIR is · 1a2577d7
  Paul McCarthy authored 4 years ago
  
  correctly prepended.
  1a2577d7
- DOC: changelog · 1f305dc9
  Paul McCarthy authored 4 years ago
  
  1f305dc9