Commits · 66eb47f437b9ce5bf21eccd0eed7ce69cbe3e6d4 · Michiel Cottaar / fslpy · GitLab

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Jan 23, 2018
- Freesurfer checks label and stats directories for vertex data · 66eb47f4
  Paul McCarthy authored 7 years ago
  
  files. Adjustment to gifti.relatedFiles.
  66eb47f4
- Change MGHImage default name · f8a52e27
  Paul McCarthy authored 7 years ago
  
  f8a52e27
- Enhancements to freesurfer module to support different vertex data types. · 778f71bd
  Paul McCarthy authored 7 years ago
  
  778f71bd
- Trimesh doesn't need to be memoized anymore - internal vertex set cache is · 7f0385d0
  Paul McCarthy authored 7 years ago
  
  used
  7f0385d0
- New Mesh.loadVertices method. Mesh.vertices only raises a notification if · 0467986e
  Paul McCarthy authored 7 years ago
  
  the vertex set changes.
  0467986e
Jan 21, 2018
- Adjusted gifti.relatedFiles function - now accepts suffixes · 211858f3
  Paul McCarthy authored 7 years ago
  
  211858f3
- Additions to freesurfer module - can now load vertex data. · 0431b85c
  Paul McCarthy authored 7 years ago
  
  0431b85c
- Mesh class does not need deprecated getBounds method · 28cde67e
  Paul McCarthy authored 7 years ago
  
  28cde67e
- New method vertexDataSets, to retrieve list of all loaded vertex data sets. · 5f976745
  Paul McCarthy authored 7 years ago
  
  5f976745
- Duh, Mesh.init(fixWinding) was not being passed through. Use absolute data · af574f26
  Paul McCarthy authored 7 years ago
  
  file path for vertex data key.
  af574f26
- Adjust freesurer/gifti file extensions · 78b22de4
  Paul McCarthy authored 7 years ago
  
  78b22de4
- looksLikeMGHImage is not a very useful function. · cd8ba60e
  Paul McCarthy authored 7 years ago
  
  cd8ba60e
- Fleshed out freesurfer module a bit. · 78c7a59a
  Paul McCarthy authored 7 years ago
  
  78c7a59a
- Cosmetics in image module. · aca36375
  Paul McCarthy authored 7 years ago
  
  aca36375
- vertexKeys renamed to vertexSets · 415f48b3
  Paul McCarthy authored 7 years ago
  
  415f48b3
- Add back .gii as a valid gifti surface extension, because wx doesn't support · d423d2e9
  Paul McCarthy authored 7 years ago
  
  double-barrelled file extensions.
  d423d2e9
- Added ALLOWED_EXTENSIONS back to fsl.data.mesh - no way to have a · 15618c55
  Paul McCarthy authored 7 years ago
  
  deprecation warning on access though.
  15618c55
- It's now GiftiMesh, not GiftiSurface · ce312df9
  Paul McCarthy authored 7 years ago
  
  ce312df9
- GiftiSurface renamed to GiftiMesh because it fits better with new · d93c4e65
  Paul McCarthy authored 7 years ago
  
  nomenclature.
  d93c4e65
- Fix multiple-inheritance object creation issue. · daea0469
  Paul McCarthy authored 7 years ago
  
  daea0469
- Re-added loadVertexData method, and a new vertexKeys method. · a98bf65c
  Paul McCarthy authored 7 years ago
  
  a98bf65c
- Mesh.__init__ accepts fixWinding for initial vertex set. · 1b97e99a
  Paul McCarthy authored 7 years ago
  
  1b97e99a
- One mesh vertex set can be set on __init__. Vertex set keys are optional. New · 1f783253
  Paul McCarthy authored 7 years ago
  
  method to query current vertex set.
  1f783253
- VTK stuff moved to its own module. Also initial (non-working) freesurfer module · be8467bf
  Paul McCarthy authored 7 years ago
  
  be8467bf
Jan 19, 2018
- Added deprecated TriangleMesh class. · 6a287f7b
  Paul McCarthy authored 7 years ago
  
  6a287f7b
- TriangleMesh is no more. Things are broken. · 6ca03276
  Paul McCarthy authored 7 years ago
  
  6ca03276
- Nifti.meta* methods are now in a base-class. Also used by TriangleMesh. · c24eaeca
  Paul McCarthy authored 7 years ago
  
  c24eaeca
- cosmetic re-ordering of mesh methods · 52d7a125
  Paul McCarthy authored 7 years ago
  
  52d7a125
- New TriangleMesh method for calculating plane-mesh intersections · 6bf405a5
  Paul McCarthy authored 7 years ago
  
  6bf405a5
- Melodic analysis is detected if either melodic_IC or melodic_oIC are present · 4fb33a00
  Paul McCarthy authored 7 years ago
  
  4fb33a00
Jan 17, 2018
- MGHImage retains the original file name · 526cfdee
  Paul McCarthy authored 7 years ago
  
  526cfdee
- Oops forgot to add a setter method for image metadata. Related fix in · 6886e0d6
  Paul McCarthy authored 7 years ago
  
  DicomImage
  6886e0d6
- New MGHImage class, for loading .mgz/mgh files. · 9f3074cb
  Paul McCarthy authored 7 years ago
  
  9f3074cb
- Image class can now have metadata added to it. This is used by DicomImage · fae775a5
  Paul McCarthy authored 7 years ago
  
  class.
  fae775a5
- New TriangleMesh.nearestVertex function. · d1bac406
  Paul McCarthy authored 7 years ago
  
  d1bac406
Jan 15, 2018
- fix to rayIntersection check · 51a87a4d
  Paul McCarthy authored 7 years ago
  
  51a87a4d
- rayIntersection method checks for no hits · c00c8433
  Paul McCarthy authored 7 years ago
  
  c00c8433
Jan 14, 2018
- Simplified rayIntersection method - I was calling trimesh ray_intersects_id · 64f5ae7e
  Paul McCarthy authored 7 years ago
  
  incorrectly
  64f5ae7e
Jan 12, 2018
- Making sure that Image(indexed=True) works without indexed_gzip present · 6f36630f
  Paul McCarthy authored 7 years ago
  
  6f36630f
Jan 11, 2018
- A big rough and ready - TriangleMesh.rayIntersection method wraps · 4a38ff04
  Paul McCarthy authored 7 years ago
  
  trimesh ray.intersect_id function.
  4a38ff04